RNA id: TCONS_00035260


Basic Information

Item Value
RNA id TCONS_00035260
length 216
RNA type snoRNA
GC content 0.41
exon number 1
gene id XLOC_017852
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 3332611 ~ 3332826 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AAGACTATACTTTCAGGGATCATTTCTATAGTTTCTCACTAGGAAATGTGTTTCGAAAGTGTTGTGTCTCCCAGACTGCGATGAAGAGTGTTGATGCTCTTTTCTAAGCGTGAATCTGGTGTAGAGAAATGATTGTCTCATTCGCTCTACAATATTGATGACCGTTCCTGACTGCTCGAAGCAGTTTTGGAGGAAAAGATCATGAACTGAGCAGCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000167524

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00036444 lncRNA downstream 940 3331457 ~ 3331671 (-) True XLOC_017851
TCONS_00036443 lncRNA downstream 5986 3326411 ~ 3326625 (-) True XLOC_017846
TCONS_00035243 lncRNA downstream 278205 3050634 ~ 3054406 (-) True XLOC_017835
TCONS_00035242 lncRNA downstream 311975 3017517 ~ 3020636 (-) False XLOC_017835
TCONS_00036442 lncRNA downstream 353527 2975705 ~ 2979084 (-) True XLOC_017833
TCONS_00036788 lncRNA upstream 88752 3421578 ~ 3424654 (-) True XLOC_017856
TCONS_00036789 lncRNA upstream 388499 3721325 ~ 3726728 (-) False XLOC_017857
TCONS_00036445 lncRNA upstream 389481 3722307 ~ 3726926 (-) True XLOC_017857
TCONS_00035266 lncRNA upstream 580598 3913424 ~ 3915770 (-) True XLOC_017859
TCONS_00035267 lncRNA upstream 609841 3942667 ~ 3953631 (-) True XLOC_017860
TCONS_00035251 mRNA downstream 12875 3316263 ~ 3319736 (-) True XLOC_017841
TCONS_00035250 mRNA downstream 12969 3312859 ~ 3319642 (-) False XLOC_017841
TCONS_00035249 mRNA downstream 22594 3290231 ~ 3310017 (-) True XLOC_017840
TCONS_00035248 mRNA downstream 41820 3290188 ~ 3290791 (-) False XLOC_017840
TCONS_00035247 mRNA downstream 56272 3238879 ~ 3276339 (-) True XLOC_017839
TCONS_00035263 mRNA upstream 13416 3346242 ~ 3390406 (-) False XLOC_017855
TCONS_00035264 mRNA upstream 14115 3346941 ~ 3403033 (-) True XLOC_017855
TCONS_00035265 mRNA upstream 495411 3828237 ~ 3911546 (-) True XLOC_017858
TCONS_00035268 mRNA upstream 621753 3954579 ~ 3997531 (-) True XLOC_017861
TCONS_00035269 mRNA upstream 693582 4026408 ~ 4031475 (-) True XLOC_017862
TCONS_00035259 other downstream 1920 3330476 ~ 3330691 (-) True XLOC_017850
TCONS_00035258 other downstream 2884 3329513 ~ 3329727 (-) True XLOC_017849
TCONS_00035257 other downstream 4042 3328354 ~ 3328569 (-) True XLOC_017848
TCONS_00035256 other downstream 5006 3327390 ~ 3327605 (-) True XLOC_017847
TCONS_00035255 other downstream 6950 3325446 ~ 3325661 (-) True XLOC_017845
TCONS_00035261 other upstream 750 3333576 ~ 3333791 (-) True XLOC_017853
TCONS_00035262 other upstream 1716 3334542 ~ 3334758 (-) True XLOC_017854
TCONS_00035271 other upstream 793314 4126140 ~ 4126254 (-) True XLOC_017864
TCONS_00035279 other upstream 1401788 4734614 ~ 4737809 (-) True XLOC_017870
TCONS_00035282 other upstream 1420753 4753579 ~ 4766486 (-) False XLOC_017871

Expression Profile

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