RNA id: TCONS_00035248


Basic Information

Item Value
RNA id TCONS_00035248
length 495
RNA type mRNA
GC content 0.40
exon number 2
gene id XLOC_017840
representative False

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 3290188 ~ 3310017 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTTGGCTGTCTGTTGGATGAAAACGCAGGTCTCAAGTTTGATAACAGCGGCATGAATGCAATGTCCAATGCAGACAAAGCTGGTGTTAAGCAGCTGAAGTGGGAAGCTCAACGCAATGACTGGATCTGTGGTAGAGATGTCAAAACTCTCCGGCGGAGAAAGGCAAATTTCAACAAGAACAAGTTTGGAATGGCCAGAAAGCATAAGAGTGTCAAGAAAACGAGAAGGTAGAATAAAGATGTCTGTTTATACTCGCGCCAGATTGGTGGACCAGACTTCTTGATCTGCTTCATGGATGCATTGACAGTCGCAGTGATGTACAGGAGAGGAGGAACTGCTTTGCTATATTTCTGTATGATTGTGGCTCTACAGTGGTTTAGTCAATATTGgctgttttatacattttcaatGGTTTATCATATCCAGGGGTTTGTCCATGCTTTGGAAAATGCTTAATCTCACAttataaaatgtttgaaaatgtttattttaaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000146870

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00035243 lncRNA downstream 235782 3050634 ~ 3054406 (-) True XLOC_017835
TCONS_00035242 lncRNA downstream 269552 3017517 ~ 3020636 (-) False XLOC_017835
TCONS_00036442 lncRNA downstream 311104 2975705 ~ 2979084 (-) True XLOC_017833
TCONS_00035234 lncRNA downstream 570929 2715949 ~ 2719259 (-) False XLOC_017831
TCONS_00035225 lncRNA downstream 673747 2613098 ~ 2616441 (-) False XLOC_017828
TCONS_00036443 lncRNA upstream 35620 3326411 ~ 3326625 (-) True XLOC_017846
TCONS_00036444 lncRNA upstream 40666 3331457 ~ 3331671 (-) True XLOC_017851
TCONS_00036788 lncRNA upstream 130787 3421578 ~ 3424654 (-) True XLOC_017856
TCONS_00036789 lncRNA upstream 430534 3721325 ~ 3726728 (-) False XLOC_017857
TCONS_00036445 lncRNA upstream 431516 3722307 ~ 3726926 (-) True XLOC_017857
TCONS_00035247 mRNA downstream 13849 3238879 ~ 3276339 (-) True XLOC_017839
TCONS_00035246 mRNA downstream 52078 3218893 ~ 3238110 (-) True XLOC_017838
TCONS_00035245 mRNA downstream 124020 3162423 ~ 3166168 (-) True XLOC_017837
TCONS_00035244 mRNA downstream 129501 3145497 ~ 3160687 (-) True XLOC_017836
TCONS_00035240 mRNA downstream 203026 3005472 ~ 3087162 (-) False XLOC_017835
TCONS_00035250 mRNA upstream 22068 3312859 ~ 3319642 (-) False XLOC_017841
TCONS_00035251 mRNA upstream 25472 3316263 ~ 3319736 (-) True XLOC_017841
TCONS_00035263 mRNA upstream 55451 3346242 ~ 3390406 (-) False XLOC_017855
TCONS_00035264 mRNA upstream 56150 3346941 ~ 3403033 (-) True XLOC_017855
TCONS_00035265 mRNA upstream 537446 3828237 ~ 3911546 (-) True XLOC_017858
TCONS_00035232 other downstream 564669 2715949 ~ 2725519 (-) False XLOC_017831
TCONS_00035230 other downstream 582068 2689548 ~ 2708120 (-) False XLOC_017830
TCONS_00035199 other downstream 2050585 1229788 ~ 1239603 (-) True XLOC_017810
TCONS_00035252 other upstream 31813 3322604 ~ 3322820 (-) True XLOC_017842
TCONS_00035253 other upstream 32775 3323566 ~ 3323782 (-) True XLOC_017843
TCONS_00035254 other upstream 33692 3324483 ~ 3324698 (-) True XLOC_017844
TCONS_00035255 other upstream 34655 3325446 ~ 3325661 (-) True XLOC_017845
TCONS_00035256 other upstream 36599 3327390 ~ 3327605 (-) True XLOC_017847

Expression Profile

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