Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00040011 |
| length | 859 |
| RNA type | mRNA |
| GC content | 0.39 |
| exon number | 3 |
| gene id | XLOC_020059 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007133.7 |
| NCBI id | CM002906.2 |
| chromosome length | 39133080 |
| location | 3153876 ~ 3159456 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0051726 | regulation of cell cycle | biological_process |
| GO:0006412 | translation | biological_process |
| GO:0002181 | cytoplasmic translation | biological_process |
| GO:0007420 | brain development | biological_process |
| GO:0022625 | cytosolic large ribosomal subunit | cellular_component |
| GO:0005840 | ribosome | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040622-2 | Predicted to be a structural constituent of ribosome. Acts upstream of or within brain development and regulation of cell cycle. Predicted to be located in cytoplasm and ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in endodermal cell; intestine; liver; and pancreas. Orthologous to human RPL36 (ribosomal protein L36). |
| ensembl_id | ENSDART00000161212 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00041859 | lncRNA | upstream | 45873 | 3110036 ~ 3110513 (+) | True | XLOC_020058 |
| TCONS_00042019 | lncRNA | upstream | 228770 | 2922151 ~ 2927616 (+) | True | XLOC_020054 |
| TCONS_00042018 | lncRNA | upstream | 328530 | 2814463 ~ 2827856 (+) | True | XLOC_020050 |
| TCONS_00042017 | lncRNA | upstream | 362825 | 2792575 ~ 2793561 (+) | False | XLOC_020048 |
| TCONS_00041858 | lncRNA | upstream | 534785 | 2602677 ~ 2621601 (+) | True | XLOC_020037 |
| TCONS_00041860 | lncRNA | downstream | 59820 | 3219003 ~ 3222417 (+) | True | XLOC_020061 |
| TCONS_00042020 | lncRNA | downstream | 169869 | 3329052 ~ 3335881 (+) | False | XLOC_020067 |
| TCONS_00042021 | lncRNA | downstream | 174320 | 3333503 ~ 3335881 (+) | True | XLOC_020067 |
| TCONS_00042022 | lncRNA | downstream | 905418 | 4064601 ~ 4099599 (+) | False | XLOC_020072 |
| TCONS_00042023 | lncRNA | downstream | 905418 | 4064601 ~ 4167110 (+) | False | XLOC_020072 |
| TCONS_00040009 | mRNA | upstream | 78039 | 3045495 ~ 3078347 (+) | True | XLOC_020057 |
| TCONS_00040004 | mRNA | upstream | 129548 | 2959879 ~ 3026838 (+) | False | XLOC_020056 |
| TCONS_00040012 | mRNA | downstream | 25317 | 3184500 ~ 3214544 (+) | False | XLOC_020060 |
| TCONS_00040013 | mRNA | downstream | 25378 | 3184561 ~ 3211990 (+) | True | XLOC_020060 |
| TCONS_00040014 | mRNA | downstream | 64306 | 3223489 ~ 3232392 (+) | False | XLOC_020062 |
| TCONS_00040016 | mRNA | downstream | 73742 | 3232925 ~ 3234494 (+) | True | XLOC_020063 |
| TCONS_00040017 | mRNA | downstream | 79291 | 3238474 ~ 3239834 (+) | True | XLOC_020064 |
| TCONS_00039978 | other | upstream | 524648 | 2631618 ~ 2631738 (+) | True | XLOC_020038 |
| TCONS_00039952 | other | upstream | 767135 | 2385384 ~ 2389251 (+) | True | XLOC_020009 |
| TCONS_00039951 | other | upstream | 770419 | 2384327 ~ 2385967 (+) | False | XLOC_020009 |
| TCONS_00039942 | other | upstream | 820357 | 2328299 ~ 2336029 (+) | False | XLOC_020009 |
| TCONS_00039935 | other | upstream | 881652 | 2269395 ~ 2274734 (+) | False | XLOC_020000 |
| TCONS_00040015 | other | downstream | 72429 | 3231612 ~ 3232634 (+) | True | XLOC_020062 |
| TCONS_00040020 | other | downstream | 216079 | 3375262 ~ 3376270 (+) | True | XLOC_020068 |
| TCONS_00040021 | other | downstream | 225549 | 3384732 ~ 3388004 (+) | True | XLOC_020069 |
| TCONS_00040022 | other | downstream | 601574 | 3760757 ~ 3760871 (+) | True | XLOC_020070 |
| TCONS_00040031 | other | downstream | 1518684 | 4677867 ~ 4677981 (+) | True | XLOC_020077 |
