Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1237654 |
| length | 269 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G1087961 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 54194641 ~ 54194909 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1237653 | lncRNA | upstream | 334 | 54194102 ~ 54194307 (+) | True | G1087960 |
| TU1237647 | lncRNA | upstream | 8174 | 54186181 ~ 54186467 (+) | True | G1087954 |
| TU1237638 | lncRNA | upstream | 12256 | 54165891 ~ 54182385 (+) | True | G1087945 |
| TU1237636 | lncRNA | upstream | 30609 | 54158789 ~ 54164032 (+) | True | G1087944 |
| TU1237409 | lncRNA | upstream | 324426 | 53869766 ~ 53870215 (+) | True | G1087730 |
| TU1237661 | lncRNA | downstream | 7401 | 54202310 ~ 54202561 (+) | True | G1087967 |
| TU1237679 | lncRNA | downstream | 44191 | 54239100 ~ 54239333 (+) | True | G1087985 |
| TU1237656 | lncRNA | downstream | 58944 | 54253853 ~ 54283905 (+) | False | LOC110538908 |
| TU1237709 | lncRNA | downstream | 107391 | 54302300 ~ 54341841 (+) | True | G1088015 |
| TU1237708 | lncRNA | downstream | 112886 | 54307795 ~ 54310437 (+) | True | G1088014 |
| XM_021624157.2 | mRNA | upstream | 389733 | 53801662 ~ 53804908 (+) | True | LOC100301661 |
| XM_021624154.2 | mRNA | upstream | 502011 | 53690304 ~ 53692630 (+) | True | LOC110537776 |
| XM_021624152.2 | mRNA | upstream | 513510 | 53662526 ~ 53681131 (+) | False | LOC110537774 |
| XM_036939510.1 | mRNA | downstream | 58810 | 54253719 ~ 54280957 (+) | False | LOC110538908 |
| XM_036937799.1 | mRNA | downstream | 164364 | 54359273 ~ 54460602 (+) | False | ppp2r2bb |
| XM_036937801.1 | mRNA | downstream | 209881 | 54404790 ~ 54460602 (+) | False | ppp2r2bb |
| XM_036937802.1 | mRNA | downstream | 244977 | 54439886 ~ 54460602 (+) | True | ppp2r2bb |
| XM_021624177.2 | mRNA | downstream | 684764 | 54879673 ~ 54888634 (+) | False | LOC110537791 |
| TU1237606 | other | upstream | 45679 | 54109690 ~ 54148962 (+) | True | G1087914 |
| TU1235839 | other | upstream | 1537146 | 52649604 ~ 52657495 (+) | True | G1086237 |
| TU1231639 | other | upstream | 4513837 | 49679023 ~ 49680804 (+) | True | G1082266 |
| TU1231371 | other | upstream | 4894294 | 49291405 ~ 49300347 (+) | True | LOC110537713 |
| TU1231375 | other | upstream | 4903372 | 49277152 ~ 49291269 (+) | False | LOC110537713 |
| TU1237658 | other | downstream | 79397 | 54274306 ~ 54280721 (+) | True | LOC110538908 |
| TU1241153 | other | downstream | 2530698 | 56725607 ~ 56726003 (+) | True | G1091217 |
| TU1241171 | other | downstream | 2557509 | 56752418 ~ 56752947 (+) | True | G1091235 |
| TU1241421 | other | downstream | 2920916 | 57115825 ~ 57117927 (+) | True | LOC110537831 |
| TU1241907 | other | downstream | 3704562 | 57899471 ~ 57914832 (+) | True | LOC110537841 |
