Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00042918 |
| length | 1566 |
| RNA type | mRNA |
| GC content | 0.38 |
| exon number | 8 |
| gene id | XLOC_021624 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007134.7 |
| NCBI id | CM002907.2 |
| chromosome length | 46223584 |
| location | 19813677 ~ 19822223 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ko05410 | Hypertrophic cardiomyopathy |
| ko05412 | Arrhythmogenic right ventricular cardiomyopathy |
| ko05414 | Dilated cardiomyopathy |
| id | description |
|---|---|
| ZDB-GENE-070501-2 | Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in heart. Human ortholog(s) of this gene implicated in Emery-Dreifuss muscular dystrophy; X-linked Emery-Dreifuss muscular dystrophy 1; and dilated cardiomyopathy. Orthologous to human EMD (emerin). |
| ensembl_id | ENSDART00000139192 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00042914 | lncRNA | upstream | 35521 | 19776460 ~ 19778156 (+) | False | XLOC_021623 |
| TCONS_00042904 | lncRNA | upstream | 209769 | 19594239 ~ 19603908 (+) | False | XLOC_021616 |
| TCONS_00042905 | lncRNA | upstream | 209769 | 19597676 ~ 19603908 (+) | True | XLOC_021616 |
| TCONS_00042902 | lncRNA | upstream | 212782 | 19594239 ~ 19600895 (+) | False | XLOC_021616 |
| TCONS_00042925 | lncRNA | downstream | 155106 | 19977329 ~ 19978737 (+) | True | XLOC_021625 |
| TCONS_00044813 | lncRNA | downstream | 523087 | 20345310 ~ 20361426 (+) | True | XLOC_021628 |
| TCONS_00042939 | lncRNA | downstream | 690918 | 20513141 ~ 20516174 (+) | True | XLOC_021633 |
| TCONS_00042946 | lncRNA | downstream | 822373 | 20644596 ~ 20649116 (+) | True | XLOC_021636 |
| TCONS_00042949 | lncRNA | downstream | 865168 | 20687391 ~ 20693148 (+) | False | XLOC_021638 |
| TCONS_00042913 | mRNA | upstream | 4650 | 19759128 ~ 19809027 (+) | False | XLOC_021623 |
| TCONS_00042915 | mRNA | upstream | 15413 | 19790962 ~ 19798264 (+) | False | XLOC_021623 |
| TCONS_00042912 | mRNA | upstream | 101689 | 19701587 ~ 19711988 (+) | True | XLOC_021622 |
| TCONS_00042911 | mRNA | upstream | 117701 | 19691146 ~ 19695976 (+) | True | XLOC_021621 |
| TCONS_00042910 | mRNA | upstream | 135744 | 19675780 ~ 19677933 (+) | True | XLOC_021620 |
| TCONS_00042924 | mRNA | downstream | 154897 | 19977120 ~ 19981813 (+) | False | XLOC_021625 |
| TCONS_00042926 | mRNA | downstream | 287863 | 20110086 ~ 20112596 (+) | True | XLOC_021626 |
| TCONS_00042928 | mRNA | downstream | 586004 | 20408227 ~ 20420243 (+) | True | XLOC_021629 |
| TCONS_00042929 | mRNA | downstream | 600438 | 20422661 ~ 20426722 (+) | False | XLOC_021630 |
| TCONS_00042930 | mRNA | downstream | 600438 | 20422661 ~ 20427299 (+) | True | XLOC_021630 |
| TCONS_00042917 | other | upstream | 5426 | 19801136 ~ 19808251 (+) | True | XLOC_021623 |
| TCONS_00042916 | other | upstream | 14638 | 19795438 ~ 19799039 (+) | False | XLOC_021623 |
| TCONS_00042898 | other | upstream | 236431 | 19560074 ~ 19577246 (+) | False | XLOC_021615 |
| TCONS_00042896 | other | upstream | 594737 | 19217528 ~ 19218940 (+) | True | XLOC_021613 |
| TCONS_00042887 | other | upstream | 631289 | 19177891 ~ 19182388 (+) | False | XLOC_021608 |
| TCONS_00042927 | other | downstream | 365402 | 20187625 ~ 20187739 (+) | True | XLOC_021627 |
| TCONS_00042936 | other | downstream | 626682 | 20448905 ~ 20470595 (+) | True | XLOC_021631 |
| TCONS_00042937 | other | downstream | 649532 | 20471755 ~ 20471870 (+) | True | XLOC_021632 |
| TCONS_00042958 | other | downstream | 1245166 | 21067389 ~ 21114732 (+) | False | XLOC_021644 |
| TCONS_00042986 | other | downstream | 1801512 | 21623735 ~ 21623849 (+) | True | XLOC_021656 |
