RNA id: TCONS_00044072


Basic Information

Item Value
RNA id TCONS_00044072
length 1362
RNA type mRNA
GC content 0.48
exon number 7
gene id XLOC_022330
representative True

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 21955056 ~ 21957383 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GGCGTTTGTTGGTTAGTGGTGTTTGTGCGGTTTGCGATTTTTGCTATTGATTACGGTTATTGATTCTCGGTTTTTGACACTTTTTCGGACTTCGACTACGGCTTTGGATTTGCGTTTCACTCGGTTTTGGATTCTCGTTAACGTACCCTTTTCTGTATTTGACAAACGGCTTCGGACACCCCTCGGATTGGTTCATACTCGGCAAAACCCCCATAATGGGAGTTTTATCAGTGTGTGAGGAAACATCAAGCAAGGTGTTTGGTGTTCCCTTATCTCATCTAAGGAAGACCGGTCAGATGAGGCAGGGTCTCCCTTTGCTCCTCACACATTTAGTGGGCTTCCTGGAGAAGCATGgcCTCAGTACAAGTGGCCTGTTCAGGGTTGATGGTGCAATATTGCGCCAATATGAGCTAAGGAAATGCTTTGATCGTGGAGGCTTTCCAGGGCTGAACATTGAGGATGTTCATTCCTCAGCCTCTGTTTTAAAGCATTTCCTCAGAGTGCTTCCCGGTGGTCTTATTCCAGCACCACTCATGATCAAGCTGCTGGAAGTGTTCAGGATGTTCAAACTGAGCAAACGTCACCGAGCAGTGAAGAAAATCCTGGACAGCCTTCCAGAGGAAAATTTTAACCTCCTCTGCTATTTGGTTTTCTTCCTGTCCCATGTGGCTGCTGAAAGAGGTGTCAACAGAATGAGCACCACCAACCTGTCCTTAGTGTTTGGTCCAATCATCTTTCATGTTCCTCAAGGCCCCACAATGCTTGAGGAGCAGGAGATGTGGATCAGCTTTACTGAGTACATGCTGGACAACCTGAAACATCTACTTCCCAACATGTACACTTATGAATCTGCCAGCAACTCACCAGCTGTCAATGTGTTTGAGGCGGGGGGAGACTCCACTATTGAGTGTGTCCAGCAGCTGCCTCTCACAGAGACCAGATCAAAGCCACCAAAAATTGGATGACTTGGGCATCTAAGACGAAGAATAACACATTTTTGGAGAAAGTTTGGCTCATGCACTGGCAAAGTGGAAGTGGTTGAAGAACCCTATGTGGCTGGAGATGGTCTACAGCAGTCGCAACAGACAGTGAGAGTTACTGGAAGAGAGTGAGGGCTGGTGAGGTCACCAGAAAACAACAGGGCTGGTGAAGGGTTGGTGAGGGTGACCAAAGACACAGGGTTGGTGAGGGTCACCACAGATGATAAGGGTTGGTGAGGGTCACCACAGATGATGAGGGATGGTGAGGGTCACCACAGACGATGAGGCATGGTAAGGGTCACCACAGACGATATCATTGTGAAGACAAAGCAGATGCTGATTCTGACTCTGAAGCTGATTGAAATAAAACTTGTCATCTTCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000145780

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00045000 lncRNA downstream 259995 21654274 ~ 21695061 (-) True XLOC_022325
TCONS_00044064 lncRNA downstream 262633 21683776 ~ 21692423 (-) True XLOC_022326
TCONS_00044999 lncRNA downstream 305181 21646702 ~ 21649875 (-) True XLOC_022324
TCONS_00044998 lncRNA downstream 947102 21004206 ~ 21007954 (-) True XLOC_022316
TCONS_00044997 lncRNA downstream 1016478 20858313 ~ 20938578 (-) True XLOC_022315
TCONS_00044733 lncRNA upstream 182394 22139777 ~ 22151790 (-) True XLOC_022332
TCONS_00045001 lncRNA upstream 254742 22212125 ~ 22216128 (-) True XLOC_022333
TCONS_00045002 lncRNA upstream 601179 22558562 ~ 22591687 (-) False XLOC_022335
TCONS_00045003 lncRNA upstream 633318 22590701 ~ 22591803 (-) True XLOC_022335
TCONS_00045004 lncRNA upstream 1054905 23012288 ~ 23023994 (-) False XLOC_022339
TCONS_00044071 mRNA downstream 8397 21902467 ~ 21946659 (-) True XLOC_022329
TCONS_00044069 mRNA downstream 8453 21803410 ~ 21946603 (-) False XLOC_022329
TCONS_00044070 mRNA downstream 140317 21806799 ~ 21814739 (-) False XLOC_022329
TCONS_00044068 mRNA downstream 157539 21775436 ~ 21797517 (-) True XLOC_022328
TCONS_00044067 mRNA downstream 191458 21750427 ~ 21763598 (-) True XLOC_022327
TCONS_00044073 mRNA upstream 106101 22063484 ~ 22072716 (-) False XLOC_022331
TCONS_00044074 mRNA upstream 106101 22063484 ~ 22113455 (-) False XLOC_022331
TCONS_00044075 mRNA upstream 106113 22063496 ~ 22130778 (-) False XLOC_022331
TCONS_00044076 mRNA upstream 110445 22067828 ~ 22072460 (-) True XLOC_022331
TCONS_00044077 mRNA upstream 538931 22496314 ~ 22523303 (-) True XLOC_022334
TCONS_00044058 other downstream 440710 21499585 ~ 21514346 (-) False XLOC_022322
TCONS_00044044 other downstream 1616459 20325741 ~ 20338597 (-) True XLOC_022305
TCONS_00044043 other downstream 1626434 20325698 ~ 20328622 (-) False XLOC_022305
TCONS_00044031 other downstream 1828845 20121003 ~ 20126211 (-) False XLOC_022300
TCONS_00044082 other upstream 686021 22643404 ~ 22647682 (-) False XLOC_022337
TCONS_00044083 other upstream 686281 22643664 ~ 22650578 (-) True XLOC_022337
TCONS_00044084 other upstream 906074 22863457 ~ 22863571 (-) True XLOC_022338
TCONS_00044095 other upstream 2190955 24148338 ~ 24167317 (-) False XLOC_022346
TCONS_00044112 other upstream 2485799 24443182 ~ 24444254 (-) False XLOC_022355

Expression Profile

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