Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00004400 |
| length | 1304 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 5 |
| gene id | XLOC_002311 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 36458563 ~ 36463715 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006691 | leukotriene metabolic process | biological_process |
| GO:0001525 | angiogenesis | biological_process |
| GO:0019370 | leukotriene biosynthetic process | biological_process |
| GO:0005783 | endoplasmic reticulum | cellular_component |
| GO:0005635 | nuclear envelope | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004464 | leukotriene-C4 synthase activity | molecular_function |
| GO:0004602 | glutathione peroxidase activity | molecular_function |
| GO:0004364 | glutathione transferase activity | molecular_function |
| GO:0008047 | enzyme activator activity | molecular_function |
| id | description |
|---|---|
| ko04664 | Fc epsilon RI signaling pathway |
| id | description |
|---|---|
| ZDB-GENE-030131-9322 | Predicted to enable glutathione peroxidase activity; glutathione transferase activity; and leukotriene-C4 synthase activity. Acts upstream of or within angiogenesis. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum and nuclear envelope. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); asthma; brain infarction (multiple); breast cancer; and cerebral palsy. Orthologous to human ALOX5AP (arachidonate 5-lipoxygenase activating protein). |
| ensembl_id | ENSDART00000077008 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00004378 | lncRNA | upstream | 77520 | 36201199 ~ 36381043 (+) | False | XLOC_002294 |
| TCONS_00004379 | lncRNA | upstream | 112695 | 36202577 ~ 36345868 (+) | False | XLOC_002294 |
| TCONS_00005924 | lncRNA | upstream | 116110 | 36201184 ~ 36342453 (+) | False | XLOC_002294 |
| TCONS_00004376 | lncRNA | upstream | 233683 | 36201194 ~ 36224880 (+) | False | XLOC_002294 |
| TCONS_00004377 | lncRNA | upstream | 233685 | 36201198 ~ 36224878 (+) | False | XLOC_002294 |
| TCONS_00004404 | lncRNA | downstream | 198974 | 36662689 ~ 36668723 (+) | False | XLOC_002313 |
| TCONS_00004405 | lncRNA | downstream | 198977 | 36662692 ~ 36666211 (+) | False | XLOC_002313 |
| TCONS_00004406 | lncRNA | downstream | 204281 | 36667996 ~ 36669034 (+) | True | XLOC_002313 |
| TCONS_00004409 | lncRNA | downstream | 238125 | 36701840 ~ 36705717 (+) | False | XLOC_002314 |
| TCONS_00004410 | lncRNA | downstream | 241909 | 36705624 ~ 36706847 (+) | True | XLOC_002314 |
| TCONS_00004397 | mRNA | upstream | 2578 | 36439293 ~ 36455985 (+) | False | XLOC_002310 |
| TCONS_00004399 | mRNA | upstream | 2584 | 36441124 ~ 36455979 (+) | True | XLOC_002310 |
| TCONS_00004396 | mRNA | upstream | 101921 | 36354863 ~ 36356642 (+) | True | XLOC_002309 |
| TCONS_00004395 | mRNA | upstream | 107870 | 36349233 ~ 36350693 (+) | True | XLOC_002308 |
| TCONS_00004394 | mRNA | upstream | 108523 | 36349225 ~ 36350040 (+) | False | XLOC_002308 |
| TCONS_00004401 | mRNA | downstream | 186507 | 36650222 ~ 36656693 (+) | True | XLOC_002312 |
| TCONS_00004402 | mRNA | downstream | 198925 | 36662640 ~ 36673388 (+) | False | XLOC_002313 |
| TCONS_00004407 | mRNA | downstream | 231882 | 36695597 ~ 36711701 (+) | False | XLOC_002314 |
| TCONS_00004408 | mRNA | downstream | 231932 | 36695647 ~ 36710620 (+) | False | XLOC_002314 |
| TCONS_00004412 | mRNA | downstream | 277787 | 36741502 ~ 36749651 (+) | False | XLOC_002316 |
| TCONS_00004398 | other | upstream | 15716 | 36439306 ~ 36442847 (+) | False | XLOC_002310 |
| TCONS_00004384 | other | upstream | 170060 | 36287841 ~ 36288503 (+) | True | XLOC_002299 |
| TCONS_00004370 | other | upstream | 298276 | 36158967 ~ 36160287 (+) | False | XLOC_002289 |
| TCONS_00004371 | other | upstream | 298376 | 36159612 ~ 36160187 (+) | True | XLOC_002289 |
| TCONS_00004361 | other | upstream | 813428 | 35645017 ~ 35645135 (+) | True | XLOC_002283 |
| TCONS_00004403 | other | downstream | 198954 | 36662669 ~ 36669034 (+) | False | XLOC_002313 |
| TCONS_00004415 | other | downstream | 496861 | 36960576 ~ 36960690 (+) | True | XLOC_002318 |
| TCONS_00004421 | other | downstream | 683954 | 37147669 ~ 37147784 (+) | True | XLOC_002321 |
| TCONS_00004438 | other | downstream | 2024993 | 38488708 ~ 38488829 (+) | True | XLOC_002333 |
| TCONS_00004441 | other | downstream | 2084374 | 38548089 ~ 38548205 (+) | True | XLOC_002336 |
