Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00004396 |
| length | 1533 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 2 |
| gene id | XLOC_002309 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 36354863 ~ 36356642 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0050896 | response to stimulus | biological_process |
| GO:0007608 | sensory perception of smell | biological_process |
| GO:0007165 | signal transduction | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0004984 | olfactory receptor activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-070806-53 | Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and sensory perception of smell. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human OR10K2 (olfactory receptor family 10 subfamily K member 2) and OR10Z1 (olfactory receptor family 10 subfamily Z member 1). |
| ensembl_id | ENSDART00000159675 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00004379 | lncRNA | upstream | 8995 | 36202577 ~ 36345868 (+) | False | XLOC_002294 |
| TCONS_00005924 | lncRNA | upstream | 12410 | 36201184 ~ 36342453 (+) | False | XLOC_002294 |
| TCONS_00004376 | lncRNA | upstream | 129983 | 36201194 ~ 36224880 (+) | False | XLOC_002294 |
| TCONS_00004377 | lncRNA | upstream | 129985 | 36201198 ~ 36224878 (+) | False | XLOC_002294 |
| TCONS_00005925 | lncRNA | upstream | 151262 | 36201209 ~ 36203601 (+) | False | XLOC_002294 |
| TCONS_00004404 | lncRNA | downstream | 306047 | 36662689 ~ 36668723 (+) | False | XLOC_002313 |
| TCONS_00004405 | lncRNA | downstream | 306050 | 36662692 ~ 36666211 (+) | False | XLOC_002313 |
| TCONS_00004406 | lncRNA | downstream | 311354 | 36667996 ~ 36669034 (+) | True | XLOC_002313 |
| TCONS_00004409 | lncRNA | downstream | 345198 | 36701840 ~ 36705717 (+) | False | XLOC_002314 |
| TCONS_00004410 | lncRNA | downstream | 348982 | 36705624 ~ 36706847 (+) | True | XLOC_002314 |
| TCONS_00004395 | mRNA | upstream | 4170 | 36349233 ~ 36350693 (+) | True | XLOC_002308 |
| TCONS_00004394 | mRNA | upstream | 4823 | 36349225 ~ 36350040 (+) | False | XLOC_002308 |
| TCONS_00004393 | mRNA | upstream | 8500 | 36345176 ~ 36346363 (+) | True | XLOC_002294 |
| TCONS_00004392 | mRNA | upstream | 18326 | 36334502 ~ 36336537 (+) | True | XLOC_002307 |
| TCONS_00004391 | mRNA | upstream | 24378 | 36328702 ~ 36330485 (+) | True | XLOC_002306 |
| TCONS_00004397 | mRNA | downstream | 82651 | 36439293 ~ 36455985 (+) | False | XLOC_002310 |
| TCONS_00004399 | mRNA | downstream | 84482 | 36441124 ~ 36455979 (+) | True | XLOC_002310 |
| TCONS_00004400 | mRNA | downstream | 101921 | 36458563 ~ 36463715 (+) | True | XLOC_002311 |
| TCONS_00004401 | mRNA | downstream | 293580 | 36650222 ~ 36656693 (+) | True | XLOC_002312 |
| TCONS_00004402 | mRNA | downstream | 305998 | 36662640 ~ 36673388 (+) | False | XLOC_002313 |
| TCONS_00004384 | other | upstream | 66360 | 36287841 ~ 36288503 (+) | True | XLOC_002299 |
| TCONS_00004370 | other | upstream | 194576 | 36158967 ~ 36160287 (+) | False | XLOC_002289 |
| TCONS_00004371 | other | upstream | 194676 | 36159612 ~ 36160187 (+) | True | XLOC_002289 |
| TCONS_00004361 | other | upstream | 709728 | 35645017 ~ 35645135 (+) | True | XLOC_002283 |
| TCONS_00004360 | other | upstream | 710065 | 35644719 ~ 35644798 (+) | True | XLOC_002282 |
| TCONS_00004398 | other | downstream | 82664 | 36439306 ~ 36442847 (+) | False | XLOC_002310 |
| TCONS_00004403 | other | downstream | 306027 | 36662669 ~ 36669034 (+) | False | XLOC_002313 |
| TCONS_00004415 | other | downstream | 603934 | 36960576 ~ 36960690 (+) | True | XLOC_002318 |
| TCONS_00004421 | other | downstream | 791027 | 37147669 ~ 37147784 (+) | True | XLOC_002321 |
| TCONS_00004438 | other | downstream | 2132066 | 38488708 ~ 38488829 (+) | True | XLOC_002333 |
