RNA id: TCONS_00006147



Basic Information


Item Value
RNA id TCONS_00006147
length 119
RNA type rRNA
GC content 0.53
exon number 1
gene id XLOC_003107
representative True

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 371322 ~ 371440 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


TTATACAGCCGTATCACCGTGCAGCCCAAGAGCGGTTACTCCCTGAAGAtatgcagggctgagcctgggcagtacctggatgggagaccacatgggaaaaactaggttgctgatgtgat

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000118705

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00006146 lncRNA upstream 15062 355307 ~ 356260 (+) True XLOC_003106
TCONS_00008505 lncRNA upstream 72223 298450 ~ 299099 (+) True XLOC_003104
TCONS_00008503 lncRNA upstream 204498 96979 ~ 166824 (+) True XLOC_003101
TCONS_00008504 lncRNA upstream 217214 153413 ~ 154108 (+) True XLOC_003102
TCONS_00008502 lncRNA upstream 315596 54204 ~ 55726 (+) True XLOC_003099
TCONS_00008375 lncRNA downstream 102940 474380 ~ 504829 (+) False XLOC_003109
TCONS_00008506 lncRNA downstream 118495 489935 ~ 494533 (+) True XLOC_003110
TCONS_00008507 lncRNA downstream 127006 498446 ~ 504829 (+) False XLOC_003109
TCONS_00006149 lncRNA downstream 130214 501654 ~ 504829 (+) True XLOC_003109
TCONS_00006151 lncRNA downstream 165582 537022 ~ 539607 (+) True XLOC_003111
TCONS_00006145 mRNA upstream 11005 355305 ~ 360317 (+) False XLOC_003106
TCONS_00006144 mRNA upstream 31475 329687 ~ 339847 (+) True XLOC_003105
TCONS_00006143 mRNA upstream 49075 296515 ~ 322247 (+) True XLOC_003103
TCONS_00006142 mRNA upstream 49076 296437 ~ 322246 (+) False XLOC_003103
TCONS_00006141 mRNA upstream 211994 141504 ~ 159328 (+) False XLOC_003102
TCONS_00006148 mRNA downstream 68865 440305 ~ 450099 (+) True XLOC_003108
TCONS_00006150 mRNA downstream 135025 506465 ~ 540252 (+) False XLOC_003111
TCONS_00006152 mRNA downstream 204225 575665 ~ 580833 (+) False XLOC_003113
TCONS_00006153 mRNA downstream 205652 577092 ~ 580690 (+) True XLOC_003113
TCONS_00006154 mRNA downstream 211702 583142 ~ 587187 (+) False XLOC_003114
TCONS_00006161 other downstream 359367 730807 ~ 730923 (+) True XLOC_003118
TCONS_00006169 other downstream 1150739 1522179 ~ 1529327 (+) False XLOC_003124
TCONS_00006172 other downstream 1174677 1546117 ~ 1546231 (+) True XLOC_003126
TCONS_00006199 other downstream 1819181 2190621 ~ 2190730 (+) True XLOC_003138
TCONS_00006215 other downstream 2262351 2633791 ~ 2649394 (+) False XLOC_003150