Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00065474 |
| length | 1344 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 7 |
| gene id | XLOC_033448 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007118.7 |
| NCBI id | CM002891.2 |
| chromosome length | 74282399 |
| location | 7495034 ~ 7508747 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006807 | nitrogen compound metabolic process | biological_process |
| GO:0005575 | cellular_component | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-040912-65 | Predicted to act upstream of or within nitrogen compound metabolic process. Orthologous to human NIT1 (nitrilase 1). |
| ensembl_id | ENSDART00000180475 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00068774 | lncRNA | upstream | 72182 | 7420212 ~ 7422923 (+) | True | XLOC_033446 |
| TCONS_00068773 | lncRNA | upstream | 179130 | 7312706 ~ 7315975 (+) | True | XLOC_033445 |
| TCONS_00068772 | lncRNA | upstream | 215209 | 7275851 ~ 7279896 (+) | True | XLOC_033444 |
| TCONS_00068771 | lncRNA | upstream | 219717 | 7265682 ~ 7275388 (+) | True | XLOC_033443 |
| TCONS_00068550 | lncRNA | upstream | 1242444 | 6249392 ~ 6252661 (+) | True | XLOC_033429 |
| TCONS_00068775 | lncRNA | downstream | 46013 | 7554760 ~ 7563288 (+) | False | XLOC_033450 |
| TCONS_00065478 | lncRNA | downstream | 46709 | 7555456 ~ 7563286 (+) | True | XLOC_033450 |
| TCONS_00065480 | lncRNA | downstream | 109289 | 7618036 ~ 7624545 (+) | False | XLOC_033449 |
| TCONS_00068776 | lncRNA | downstream | 835972 | 8344719 ~ 8352307 (+) | True | XLOC_033457 |
| TCONS_00068551 | lncRNA | downstream | 861375 | 8370122 ~ 8370761 (+) | True | XLOC_033459 |
| TCONS_00065471 | mRNA | upstream | 122046 | 7279903 ~ 7373059 (+) | False | XLOC_033445 |
| TCONS_00065470 | mRNA | upstream | 245316 | 7151832 ~ 7249789 (+) | True | XLOC_033442 |
| TCONS_00065468 | mRNA | upstream | 363240 | 7048245 ~ 7131865 (+) | False | XLOC_033440 |
| TCONS_00065466 | mRNA | upstream | 451972 | 7019911 ~ 7043133 (+) | False | XLOC_033439 |
| TCONS_00065475 | mRNA | downstream | 3167 | 7511914 ~ 7643941 (+) | False | XLOC_033449 |
| TCONS_00065476 | mRNA | downstream | 43261 | 7552008 ~ 7624101 (+) | False | XLOC_033449 |
| TCONS_00065477 | mRNA | downstream | 43358 | 7552105 ~ 7641101 (+) | False | XLOC_033449 |
| TCONS_00065479 | mRNA | downstream | 61954 | 7570701 ~ 7575010 (+) | True | XLOC_033451 |
| TCONS_00065481 | mRNA | downstream | 121662 | 7630409 ~ 7641330 (+) | True | XLOC_033449 |
| TCONS_00065469 | other | upstream | 401204 | 7048256 ~ 7093901 (+) | True | XLOC_033440 |
| TCONS_00065458 | other | upstream | 694416 | 6756206 ~ 6800689 (+) | False | XLOC_033436 |
| TCONS_00065457 | other | upstream | 797014 | 6697973 ~ 6698091 (+) | True | XLOC_033435 |
| TCONS_00065428 | other | upstream | 1924911 | 5569548 ~ 5570194 (+) | False | XLOC_033402 |
| TCONS_00065420 | other | upstream | 2305209 | 5189778 ~ 5189896 (+) | True | XLOC_033396 |
| TCONS_00065483 | other | downstream | 263418 | 7772165 ~ 7772378 (+) | True | XLOC_033453 |
| TCONS_00065484 | other | downstream | 270216 | 7778963 ~ 7779176 (+) | True | XLOC_033454 |
| TCONS_00065492 | other | downstream | 920207 | 8428954 ~ 8429919 (+) | True | XLOC_033460 |
| TCONS_00065497 | other | downstream | 1161718 | 8670465 ~ 8681181 (+) | True | XLOC_033464 |
| TCONS_00065500 | other | downstream | 1532428 | 9041175 ~ 9046302 (+) | True | XLOC_033466 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000343_00707941_00712532.mRNA | True | 827 | mRNA | 0.53 | 4 | CI01000343 | 707941 ~ 712626 (+) |
