Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00065727 |
| length | 830 |
| lncRNA type | retained_intron |
| GC content | 0.34 |
| exon number | 2 |
| gene id | XLOC_033590 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007118.7 |
| NCBI id | CM002891.2 |
| chromosome length | 74282399 |
| location | 19495379 ~ 19502294 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0008150 | biological_process | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0003674 | molecular_function | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-041111-14 | Predicted to be located in membrane. Predicted to be integral component of membrane. |
| ensembl_id | ENSDART00000173684 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00065722 | lncRNA | upstream | 13661 | 19484269 ~ 19484850 (+) | True | XLOC_033589 |
| TCONS_00065718 | lncRNA | upstream | 22198 | 19474190 ~ 19476313 (+) | True | XLOC_033588 |
| TCONS_00065716 | lncRNA | upstream | 97360 | 19398086 ~ 19401151 (+) | True | XLOC_033587 |
| TCONS_00065715 | lncRNA | upstream | 105428 | 19392400 ~ 19393083 (+) | False | XLOC_033587 |
| TCONS_00068566 | lncRNA | upstream | 324549 | 19173197 ~ 19173962 (+) | True | XLOC_033585 |
| TCONS_00068804 | lncRNA | downstream | 13312 | 19512765 ~ 19514903 (+) | True | XLOC_033592 |
| TCONS_00068805 | lncRNA | downstream | 137276 | 19636729 ~ 19638389 (+) | True | XLOC_033598 |
| TCONS_00068806 | lncRNA | downstream | 164583 | 19664036 ~ 19664661 (+) | True | XLOC_033599 |
| TCONS_00065737 | lncRNA | downstream | 239262 | 19738715 ~ 19746525 (+) | True | XLOC_033600 |
| TCONS_00065739 | lncRNA | downstream | 263143 | 19762596 ~ 19771819 (+) | True | XLOC_033601 |
| TCONS_00065720 | mRNA | upstream | 6884 | 19482877 ~ 19491627 (+) | False | XLOC_033589 |
| TCONS_00065721 | mRNA | upstream | 7623 | 19483277 ~ 19490888 (+) | False | XLOC_033589 |
| TCONS_00065719 | mRNA | upstream | 15343 | 19482084 ~ 19483168 (+) | False | XLOC_033589 |
| TCONS_00065717 | mRNA | upstream | 20861 | 19424857 ~ 19477650 (+) | False | XLOC_033588 |
| TCONS_00065714 | mRNA | upstream | 97010 | 19389304 ~ 19401501 (+) | False | XLOC_033587 |
| TCONS_00065728 | mRNA | downstream | 3291 | 19502744 ~ 19506453 (+) | False | XLOC_033591 |
| TCONS_00065729 | mRNA | downstream | 3302 | 19502755 ~ 19504922 (+) | True | XLOC_033591 |
| TCONS_00065730 | mRNA | downstream | 28812 | 19528265 ~ 19538406 (+) | True | XLOC_033593 |
| TCONS_00065731 | mRNA | downstream | 52928 | 19552381 ~ 19558842 (+) | True | XLOC_033594 |
| TCONS_00065732 | mRNA | downstream | 62592 | 19562045 ~ 19587542 (+) | True | XLOC_033595 |
| TCONS_00065712 | other | upstream | 471441 | 19026314 ~ 19027070 (+) | True | XLOC_033584 |
| TCONS_00065710 | other | upstream | 483000 | 19014767 ~ 19015511 (+) | True | XLOC_033581 |
| TCONS_00065709 | other | upstream | 489932 | 19007840 ~ 19008579 (+) | True | XLOC_033580 |
| TCONS_00065656 | other | upstream | 2151372 | 17346399 ~ 17347139 (+) | True | XLOC_033546 |
| TCONS_00065651 | other | upstream | 2237743 | 17255795 ~ 17260768 (+) | False | XLOC_033545 |
| TCONS_00065774 | other | downstream | 968096 | 20467549 ~ 20471363 (+) | False | XLOC_033616 |
| TCONS_00065791 | other | downstream | 1145728 | 20645181 ~ 20651731 (+) | False | XLOC_033625 |
| TCONS_00065803 | other | downstream | 2132647 | 21632100 ~ 21752761 (+) | False | XLOC_033634 |
| TCONS_00065804 | other | downstream | 2221675 | 21721128 ~ 21752761 (+) | False | XLOC_033634 |
| TCONS_00065845 | other | downstream | 3296630 | 22796083 ~ 22800865 (+) | False | XLOC_033659 |
