Gene
RNA
| Item | Value |
|---|---|
| RNA id | unassigned_transcript_53 |
| length | 72 |
| RNA type | tRNA |
| GC content | 0.55 |
| exon number | 1 |
| gene id | trnac-gca |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053112.1 |
| NCBI id | CM020909.1 |
| chromosome length | 48724115 |
| location | 12860284 ~ 12860355 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU5400 | lncRNA | downstream | 52386 | 12804502 ~ 12807898 (-) | False | LOC120561813 |
| TU5398 | lncRNA | downstream | 61053 | 12798811 ~ 12799231 (-) | True | G3940 |
| TU5393 | lncRNA | downstream | 75383 | 12783201 ~ 12784901 (-) | True | G3935 |
| TU5382 | lncRNA | downstream | 93181 | 12763447 ~ 12767103 (-) | True | LOC120555888 |
| TU5383 | lncRNA | downstream | 93181 | 12763447 ~ 12767103 (-) | False | LOC120555888 |
| TU5474 | lncRNA | upstream | 176925 | 13037280 ~ 13040234 (-) | False | LOC120560438 |
| TU5464 | lncRNA | upstream | 198491 | 13058846 ~ 13065061 (-) | True | G3995 |
| TU5521 | lncRNA | upstream | 228837 | 13089192 ~ 13157217 (-) | True | G4032 |
| TU5528 | lncRNA | upstream | 277703 | 13138058 ~ 13148603 (-) | False | LOC120567932 |
| XR_005640640.1 | lncRNA | upstream | 287885 | 13148240 ~ 13151623 (-) | True | LOC120567932 |
| XM_039805083.1 | mRNA | downstream | 27928 | 12804508 ~ 12832356 (-) | True | LOC120561813 |
| XM_039812176.1 | mRNA | downstream | 57458 | 12799408 ~ 12802826 (-) | True | LOC120565993 |
| XM_039810867.1 | mRNA | downstream | 105148 | 12752362 ~ 12755136 (-) | True | LOC120565245 |
| XM_039804149.1 | mRNA | downstream | 108855 | 12727901 ~ 12751429 (-) | True | LOC120561165 |
| XM_039804120.1 | mRNA | downstream | 139842 | 12704182 ~ 12720442 (-) | False | LOC120561143 |
| XM_039805684.1 | mRNA | upstream | 69777 | 12930132 ~ 12962722 (-) | True | ncf4 |
| XM_039805671.1 | mRNA | upstream | 117196 | 12977551 ~ 12989241 (-) | False | baiap2l2b |
| XM_039805664.1 | mRNA | upstream | 117197 | 12977552 ~ 12989241 (-) | True | baiap2l2b |
| XM_039802943.1 | mRNA | upstream | 130209 | 12990564 ~ 13028393 (-) | False | LOC120560419 |
| XM_039802924.1 | mRNA | upstream | 130209 | 12990564 ~ 13028392 (-) | False | LOC120560419 |
| TU5319 | other | downstream | 200322 | 12642272 ~ 12659962 (-) | False | c1qtnf6b |
| TU4966 | other | downstream | 1867083 | 10977643 ~ 10993201 (-) | False | nacc1b |
| TU4974 | other | downstream | 1955049 | 10899558 ~ 10905235 (-) | True | G3586 |
| TU4721 | other | downstream | 2818280 | 10026270 ~ 10042004 (-) | True | G3373 |
| TU4646 | other | downstream | 3293056 | 9549981 ~ 9567228 (-) | False | LOC120559295 |
| unassigned_transcript_54 | other | upstream | 1339 | 12861694 ~ 12861765 (-) | True | trnac-gca_1 |
| unassigned_transcript_55 | other | upstream | 2175 | 12862530 ~ 12862601 (-) | True | trnac-gca_2 |
| unassigned_transcript_56 | other | upstream | 5613 | 12865968 ~ 12866039 (-) | True | trnac-gca_3 |
| XR_005639486.1 | other | upstream | 131312 | 12991667 ~ 13028393 (-) | False | LOC120560419 |
| TU5471 | other | upstream | 176925 | 13037280 ~ 13040234 (-) | False | LOC120560438 |
