RNA id: TCONS_00068032


Basic Information

Item Value
RNA id TCONS_00068032
length 12981
RNA type mRNA
GC content 0.47
exon number 86
gene id XLOC_034981
representative True

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 41348543 ~ 41396860 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CGACATCCAGCGGTTCATGAATGTTATTGTCCATCCACAGTGACGTGCTTCAAGCAGGAAGTGAGCGCGTTCATGTGGTTGTGTTGTGCTGTTTTGCCGCCTTGACGCAAGCTCACTTACTGTACATTTGCATTtgcaaatgtttaatatttactgATGTAAGCAAAGGAGAGAAACTATGGCTGCTGATACTTCCACTGTTGGAGGGATACAAGGTTACCTTCTTAAGCTCCACTCATCCCTTGAAGACACAGTGAGCACGAATGTTGCTATAGTCTGCCATGACATTATTGGAGACTTGGGGCAGGAGTGCATGATAACTAAGAATGAGAATGAACTGGTTTTACAGACATCTTTGCTCTTTGCAAAGGAAGAGGGATTGCTTAGCTTTCTTCGCAGGTCTCTGTCTACTGAAAAGCTGGGGACTACAGGAGTGGAGATTCTGCGGGAAACGAGAGTGGAGATTATGAATTTCTTAGGGGCATTTCTACAGAGAATGTCAGCCACTGTCCGAGGATGGGAAAAGAACTATGCTGTCGAGCTTAAGGACACGTGCATTGTCGTTTACACAAAGGACAAATCTGCAAAGTGCAGAAATCCTGCTTTAGATCTTCTAATCAAAATACTGTATCTCACGAAAGACTCCAGCATCACACAGAATCTCAGAATTGGAGATATGTTCAACAAATTTTACGGAGAGTTGTGTCAGAAGCATAAGATCCCTGATACAGTCCTGGGTTGCATTTATGAACTTCTTGGAGTGCTGGGTGAAGTGCACCCCAGCGAGATGGTCAACAACTCTGACAAACTCTACAAGGCCTACCTGGGTGAACTGAAAGGACAGATGACATCTACTACAAAGGAGCCGAAGCTTCCTGTTGTTGCCGGATGTCTGAAAGGAATCGCCGCTCTGATGGTGAACTTCACCAAATCAGTGGAagaagACCCAGCCGCATCGAAAGAAATCTTTGATTATGCCCTAAAGGCTATTAGTCCACAGACTGATATAAAACGATATGCAGTCATCTTTGCTGGCCTAAAACTATTTGCGAAGCACTCTAGCCAGTTTGGCAGCTGTCTCATGGATCATTACATCTCAATCTTTGATGTTATGTCCAAACATTGTGGACACATAAATGCAGAGCTGAAAAAGAGCAGTTACACCGCTCTGGAGTCTTTCCTAAAACAGGTGGCCACACTTGTGGCAGAAAACATAGAGCTTCATAAAAGCAAGCTGAAGTTTTTCATGCAGAAGTTTTGTGCAATCATCAGGACCATGGACTCCACTAATAAAGAGCTGTCCATCGCTATCAGAGGATATGGCCTGTTTGCTGcgCCGTGTAAGGTGGTGTGCCCCCAGGATGTAGATCTGATGTACACAGAGTTGATTCAGCGATGCAAGCAGATGTACTTGACTGAGTCTGACCGGGATGATGACAACGTCTACCAGCTGCCAAGCTTCCTCGACTCCATAGCGAGTGTTTTGGTACACCTTGACCGGATCCCAGAAGTGTACACACCTGTACTTGAGCGTCTCCTTGTGGTCCAGATGGACAGTTTCCCTCAGTACAGCCAGAGAATGCAGCATGCCACCTGCCGCTCCATTGTCAAGGTGTTTGTTGCAATGGCGGTTCGGGGTCCTGTCCTCTGGAGTTTCACTAGTTCCGTGGTTCACCAGGGCCTGATCAGAGTGTGCTCCAAGCCGGTTCTTCAGTCAGATGAGCGAGGGGTTTCTTCAGGGGTTTCTCAATCAGAGGATTCTACTCTGGTGCGCTCTGGGAAATGGAAAGTTCCTTCATCAAAGGACTACCTTGAGCTCTTCAAGGGGCTTCTGGACTGTGAAAACCTCAAAGACACAGGATTTGTGGATGGAGCTCCAGCTGCCAAAAACTACAACCTGAGAGACTTAAACCGACACTTATATGATGCACTGGTGCAGTCAGTCATGAAGATTGTGGAGAAACTTGATCTTTCAGTGCAGAAAGTCAGTGCAGCGGATGAGGTACAGAGTGATGCAAGTGCTGGGATTGTGCTGTCATCTGATCCAACAGCAAACCTGATGCCCAACAAACCCAAAGACTTCATTGCCTTCATCAACTTAGTGGACTTTTGCAGTGAGTTGTTGCCTTCAAGAAATCCTGAGTATTTTGCTCAGTGGATGCACCCCCTGTGTCACGAGCTCATCCTGCAGTCGATACGTTTCCCTCTGGTCAGTGGTTTTTATAAGCTCCTCTCCCTCTCTATGGGCATTGCCAAGAAAACCCAGTATTTTCAGGACGTAAAACAATGTCCTAAACAAGTTGGTGGCTCAACCATGGAGAACGCCTGTTTTTCACTCCTTGCAAAGTTTGGAAAAGAGGTTTGTGTACGTATGAAGCAATATAAAGACGAGCTCCTGGCTGCCTGTCTGATGTTCATCCTCTCGCTTCATCCTGGCATGGTGGCTCTTGACATCAAGGCATACATCCCTGCTCTACAGGCTGCACTGCGGCTGGGTTTGAGTCACGCTCCTCTGGCCACAGCAGCACTGGATGCTCTGGAGTCCTGGTCGTCTTTTATCCCTGCTGCCATCCTGCAACCACATTATACAGACATACTGCCACATTTAGATGGCTACCTCAAAACCACTAGTAGCTCTGAAAAAGATGACAGCAATATGGAAGTGACATTTGTGTCAACGGGAAGTTCAAAAGGTTATGGACAAGTGTTGTTGAGACTCCTGAAGAAATCAAAGCGCTTTTCTCTGGGAGACGAGTCTCCAATCGCTGCTGTGAGACGCAGGGTGGTACGTCTACTCGGACACCTGGGAGGACAGCTCAACAGGAGCCTTGTGACAGCTGTTTCTGCGGAGGACATGATGAAGCGGTTTGTAGCGTGGGATTGTGAGAAGAGGCTGAGTTTTGCTGTGCCTTTTAAAGACATGAAGCCTGTGATCTACCTGGACTCTTTCTTGCCACGGGTCACAGAGCTCGCACTGTCCTCCAGTGATAGACAGACTAAAGTTGCAGCCTGTGAGCTTCTACACAGTCTGGTCATATATATGGTGGGTAAAGGAGCCCAGATGACAGAAGATGACAAGTCTGCTCCACCCATGTACAACCTACATCGAAAAGTCTTTCCTGTTCTTCTACGCCTGGCTTGTGACGTTGACCAGGTGACGCGGCAACTCTTTGAGCCTCTGGTGATGCAGCTTATCCACTGGTTCACCAACAATCGAAAGTTTGAGAGCCAAGACACAGTGGCAGTGCTGGAGGCCATCCTGGATGGGATTGTGGATCCATTGGACAGCACCCTCAGAGACTTCAGTGGCACCTGCATCCAGGAATTTGTCAAATGGTCTATCAAACAGACCACCCCCAAACAGCAGGAAAAGAGCCCGGCCAACATGAAATCCCTCTTCAAGCGTATCTACAGCTTGGCTTTACACCCCAGTGTCTTCAAGAGGCTTGGAGCTGCGCTGGCCTTTAACAGCATGTACAGGCAGTTCAGGGAAGAGAGCTCTTTGGTTGAGCAGTTTGTCTTCGAGGTGCTGGTGGTGTTTGTTGAGAGTTTGGCTTTGGCCCACTTTGATGAAAAGTCTGTGGGAACTGTCCAGCAGTGTTGTAGTTCACTGGATCATTTGAAGAGAATCATCAAACACAAGGCAGACTCACTAAATATAAACTCCAAGAGACGGATACCCAGAGGTTTTCCTGCAGATCAGTCAGTGTGTTTATCTAATGTAGTCCTTTGGCTGCTGACCCAGTGTGGAAGACCCCAGACTGAATGCAGACACAAAAGCATGGAGCTTTTCTTTGAATTTGTGCCTCTGCTGCCAGGTAATTCATCTCCTGCGATGTGGCTGGACGAGCAGTTAAAGCAGCGTGGTCCAGGTTTTCTCATTTCATGTTTAGAGGGAGGTGGTTTACTATCTCAGCCCACCTTGAGAGAGATTGAAGCCCCCTTCAGCATCAGAGGCACCTTACAATGGATGGATCTGCTGCTGGCTGCTCTTGACTGCTACAACACCTTCACAAACCTGCGGTGTCTGCAACTCCAGAGGATCCTGGGCACTTGTGAGAAGTCCAGCTTTTTGCCTGCTGTACATTTCTTCCTAACAGAGCTGTCCATGCAGGACATTCAGGCTGCCAGGGCCTGCTTCAGATTGGGAAATGCAGGTCAGTCACACTTCAGCCCTCGTGAGACCGAGCAGTACAACTACAGCAAGTGCTCCATCATTGTCCGAATGCTGGAGTTCTCCACCATGGTGCTGCAGAAATGCCCACAGGACCTCTGGAAGTTAATGGAGAAAGATGTGTTCAACTCTTCCCTCTTCACATTGGTGGTGTTGGCAGTATGTGAGCCCTCCTCCATTGGATTCAACATGGCGGATCTAGAGGTGATGACTCACCTGCCGGAGGTGTGCTTTCCTTTGCTTAAAGCTTTGGCATCAGCACCTTACAGGACACAACTGGAGAGCTGCATTCGGATGAGGATAACAAAACAAAGTGTGGAGGAGCTGTGTGCTATTGATTTGTATGAGACAGACACCAGAAACAGCCATGCTAGCATGAATCTGTTACTCTCAGCCTGTAGGCAGCTTCACCAGTCTGGGCTGCTCAACTCAGTTTTGCACAGTCAGGATGCTAGTTATGGTTGCTCTTTGGGCTCCAAACTTCTCACTAGTGTGTATAAAAGCATTGCTCCAGGAACTGACAGGAAGTCTTTACCCTCCATGGATGTTGGCAGCAGAAAGTTGGCTGACAGACTTGTGCAATTATCGTTTTGTTTGGGTGATCAGAGTGAACAGACGGTTGGCCTTTTACTGAACACCATCACACTCTCAGTCCCTCTCTCTGGCAGTCTGAACCCTCACTTCCTCAGCTTCTCTCATGGGGAGTACTTTTACAGCCTCTTCCAAACATCTCTCAATACTGAGTTACTGCGCAGTGTGGATCGGTCAGTGCCGCTGCTGCTGTCCTCAGCCAACCAAAACCCCAGCATGgttaGTGTTTTGCTGAACGGCATGTTGGATCATAGTTTTCGTGAGCGTTCTGTCAGAAAGTCCCAAGGTTCACAATTGGCTGAGCAAGTGCTCAAGGGGTGGGATTTGCTCAGGCCATGGTGGGATGGTCCTGCGGCAACACCAGAAAGCAAAACCTCAGTCCTGTCATTGCTTGCCAAAGTGCTCCAGATCGATTCATCTGTGTGCTCCAATACAAGTCACCCAGCATTCAATGCTGTGTTTACCACTTTCACAGCTCTTCTCACAGATGTATCTATGCCATTAAATCTCAAGAGTCAGGCTCTTATCATGCTGCCTTTCTTCACTGCATTGCCCAGCATGCCTTTAGAGGAGCTCAGGAGGGCTCTGGAGTCACTGGTGGCTACACATTTCCCTATGCAGTCAGATGAATTTCCACGTGGATCTCTACAGTGCAACAACTACATGGATTGCATTCGCAAGTTTTTAGAGGCCCTGCAACTGTCTCAGAGTCCTTTGTTATTGAAGCTTATGGCTCGAGTTCTGTGCCGGGACAAAAAACATATCATGGAGGAGCTTTTTCAGGCCTGCTTTCAAAAAATTGCTCATCAGTCTTATTTGGGAAAACAAGTTCTTCTCCTCAGCTCCACCTACCAATCATTTCAAGCCAAAGAAGTTCCATCAAACTTCATGCTCATGGGTCTGATAGACAGAGTCCTGCTGCCGCTGGCCTCTCACTGCAGTCCTCAAGCTCTCTCTCAGTTCTTTATCTCTAATATTGCTGATATCATGACTACTCTACAGACACGCTTCACCAAGTCTGTTGAGTCGGTGTTTGAGAGTCAGATCATGATGAAGATTGGCTGTTGTAAGCTGTTGGAGGTGTTGTATTCTCGTCTGCCTAAAGAGGAAGTCTATTCTAAAAACTCTGCCATCAACCAGGCCTTCTGTGGCACCGGCTGCGCTGAAGGCAATGAGCTTTCCAAGAACCTCCTCAAATCATGTTTTGAGGCCTTCACGGAGAACATGACAGGAGAGATGGTACTGCTGGAGTTGAGGAGACAGTTTCACTGCGCTGCTTACAACTGTGCCATAGCCCTTATCAGCTGCAGCTTCAACGAAACCAAGTTCTACCAGGGCTTCCTTTTCACTGAAAAACCTGACAAGAATCAGTTCATATTTGACAATCTTATTGATTCGCAAAGGGTGTACAACTTTCCTATAGAGATTGATGTCCCTATTGAGAGGAAAAAGAAGTATGTCATGATTAGGAAAGAAGTGAGTGGAGAAAACGGAGacgcACCTGTATATCTGTCTTCCCAGTCCTACATGGCAGACAGCAGTCTCAGTGAGGAGATGAGTCAGTTTGACTTCTCCACTGGGGTTCAAAGCTTCTCCTACAACTCTCAGAATCCTTCAGGCGTGAGCAGCTCCAGCAGGATGCGGGAGCGCAAGGAGGTTTTGTCTCAGGACGAGACTGTGGAGCTGGAGATGGATGAGCTGAACCAGCATGAATGTATGGCCAATATGACGGCACTGCTGCGCCACATGCAAAGGAACAACATCACCCCGAAAGTAGAGGAGGGTGTGAGACCTAGTGATCTTCCTCCATGGATGAAGTTCCTGCAGGGGAAGCTGGACAATCCATCTACTCCTCTCAACATTAGACTCTTCATCGCCAAACTTATCATCAATACTGAGGAGATTTTTCGTCCATATGCCAAGCATTGGCTGGGCCCACTGATGCAGCTGGTGGTTTCCAGTAGCAATGGAGGAGAGGGCATTCACTTTATGGTGGTGGACATTGTGGTCACAGTCCTTTCATGGGCCAGTGTAGCTTCACCAAAGGGTAACACAAGAGATGAAGTTTTGGTCAACAGGCTTCTTGGGTTTTTGTTTAAGAACTGCTTCCACAGCAAACGGGCTGTTTTCCGTCACAATCTGGAGATTATACGCACAGTTGTCGAGTGCTGGAAGGACTGCCTCACAATACCCTACGATTTGATATACGAGCGGTTTGCTGGAACAGATCCCAACAGCAAGGATAACTCTGTGGGAATACAGCTTTTAGGCATTGTAATGGCCAATAATCTTCCTCCTTATGATGCTGCGTGTGGCATCGAGCATGACAGATATTTTCAGTCGCTGGCCAATAATCTATCATTCATCAGATATAAAGAGGTGTACTCAGCAGCTGCTGAGGTCATTGGGTTAATCCTGAACTACATGACAGAAAGAGAAAATCAAATTGAAGGGACCTTATTTAACATCACTGTTACGAAACTGATGGATTTGAGAAAGAAGGAGGTGGATGACAAGTTTATTGTTTGCTTGAGCAAAGTGTCAAAACACTTTCCACCTTTGGTGGACCGattCATTAATCCTGTATTTTATTTGCTGCCAAAGCTGCATGGCATGTTGAAGACACACTGTCTTGAATGCGTGCTGAGTCGTGCTGATGTCATCCCTGAAATCTTCCTGCACCTAAAGACCAAAGGCCTCTCACAGATCATGAGCCACAAAGATGAGGGCAGACAGCGGGTTTGTCTGGACATTATTCATAAGATCCTGGCATGTCTGAAGCCAGAAGAGCTGAAGGAAATTTTGGGAGCTGTCACAGCATTCGCATCTCACCCTTCTCCTGTGTGCAGAGAGAGAATGTATGATATCCTGATGTGGATTCAGGACAACTACAGTGACTCTGAGAGCAGGGAAGACAGCACGTCTGTGGAAGTTCTCAGTGTTGCTCGAGAGACTCTCCTGCAGGGACTGACAGATGAAAACTATGGCTTACAGCTTTATGTGCGCAATTTCTGGAGTCACGAGAGCCGTTTACCCCCAGAAACACTGGAGCGTATGCTTGTCGTGCTGAAATCGCTGTATTCATCCCGCATTGAAGAACAGTTCCTCAGTTTGGCCACTGACCTACTTCTTGAGATGACCAGTCACAGCCCTGACTTCACACGCAACATGTTTGAGTTCCCTCTCTCTGAGTGCAAGTTCCAGGACTACACAATAGACTCTAACTGGCGTATGCGGAGTACGGTCCTCACGCCCATGTTTATGGAGACTCAGGCCACTCAGGGGGCAGAAGCTGCTGGCAGTCAGGCAGCCACAGTGAGGGGCCAGATCAGGGCCACACAGACGTCCCTGGAGTTCTCTCAGACTCTGGCTCCTGGTGCAGGACGTCGTTCAGCATATAACTGGTTAACTGGGAGTAGTGTGGACACACTGGCTGATTATTCCCTTTCATCTGATTCTTTATCATCACTTTTGGTGTTTGACAAAAAGAGATCAGAGCGTCCACAAGCTGCCTGGAGAGCTGTGGGTGCAGGGTTTGGCTCTAAACGTCTCACTGCCACCAGTGACGACACAGACAGCCGGACTGCAGCTGAGCGGGAGCGGCGTGCAGACATTCTGAGACTCAGAAGGAGATTTCTGAAGGATAAAGAGAAAGAGAGCATAAAATTCGCCAAGAAAGAAATCCATTCTCAAAGAACTGAGAGGGAGAGAAGAGCAGATCTAAAGATCCGCCAGGATGCTCAGGTCACGCTTTACCGCAGCTACAGAGTTGGAGATCTTCCTGATATTCAGATTCAGTTCAGCAGCCTCATTGCGCCACTACAGGCCCTGGCACAGAGGGATGCCACACTAGCCAAGCAGCTGTTCAGCTCTCTGTTTGCTGGTGTGCTGGTTGAAATGGAGAGATTGAAATCAAATAAAGAAACAGCCGACATTCTGAAGGAGCTAGTGCAGACTCTAAACGCTTTCCTTAACAAGAGCACAGTCTACTTTCCGCCCTTCATTTCTTGCAtccagGATATGAGTTACCATCATAAGGCTCTTCTCGGTGTAGAGCCGTCTCTGGTCAGTGCCACCTGTCTTGCCAGCCTGCAGCAGCCCATGGGCATCCTGTTACTGGAGGAGAGTTTACTTCATGGAGCTGGAGCATCAGAGGAACCTCCATTGAAACGAGCCCGAGGCAAACGTGAGCTGCCGCCTGACACAGAGAGATGGATCCATCTTGCAAAACTTTACAGGTCACTGGGAGATTATGATGTTGTCAGGGGAATCTTTAGTGGCAAGATTGGCACAAAGTCTATAACATTCACAGCCCTGCAAGCAGAAGCAAAGAGTGACTATGCAGAAGCTGTGAAGCTCTACAATGAGGCTCTAAACAAAGAGGACTGGGATGATGGAGAGCCCACAATCACAGAGAAAGATTTCTGGGAGATTGCAGCGCTGGAGGCCTACAATCACTTGACAGAGTGGAAATCTCTTGAGTACTGTGCCACGGTCAACATTGACGACAGCTCCCCTATCAGACTAGACAGAATGTGGACAGAGACATTTTATGTGGAAACATACCTGCAGTACATGATGCGCAGTATGTTGAAGCAGTTGCAGATGGGTGAAACAAATCAGGATCTACTGAGCTTTGTCGATGCTGCCATGAAGACAGAGGAGCACAAGATCATCATGGAGACTCACTACAGTCAAGAGCTGAGTCTGCTGTACATCCTCCAAGAAGACTATGACAGAGCTAAATACTACGCCAACAACTGCATGCAAGTCTTCATGCAGAACTACTCCAGCATCGACCCCTTGCTGAACCGCAGCCGGCTGACTGTGCTGCAGTCTGTCCAAGCTCTGACCGAGATCCAAGACTTCTTGAATTATATCACAGGAGATGTCTCAGTGAATTCTCTCAAGTTCATGATCAGACGGTGGACCAGCCACTATCCAGATGCTAAACTGGACCCCATGAATGTGTGGGATGACATCATCACTTCTCGTTGTTTCTTCTTGGATAAGATTCTGAAGAGACTGAAGTCCACCCCTGAAAACAGCATGGAGGTGGACGGTGCAGACCAGGGCAGTGGAGAGGAGCTCGGAGTGCTGGTCAAAACCTGCAAGTTCAACATGAAACTCCAAATGGCTGACAGCGCATGGAAACAGAATAACTTTCCAGTGGCATCCAAGCTGTTGAAGGAACTTCACCGTCATGCAAAGATTGATGATGCACGGTTGCTCCGCTGGGTCCACAGCTTCAGCCGTTTCACTCACAAAAGAATTGCTAGACTTGGACCTTCTGAAAAGATTAATGCTTTACTCAAGACTGTTCCACTTTTGAAGGATGCTGAGAGACAAAGCGAAGCGCTATCTGCCCGGATGCTTCGTGACCAGAGAATTCTTCTGGGGACCACTTATGACCTCATGGCTGGTGCTGCAGATCGCAGTCCCTTTGCTCTGGAGACCCTCGGGGAAGAGAAAGTACAGAAGATTCTCCAACTTTCGCAGGCCTCATCCATCGCCCAgGTGGTGGAGGGTCTGCAGATTCAGGCTCTGGAGTTGTTGAGGAGTGCTGCATGTAAAGCAGAAGAGGAAGAGCAGTCTTTCAGCCAACAGCATGTGAACACGCATGGTATTGTGGAAGCCTACATGACCATGGCCAACTTCTGTGACCGAAGACTACGAGAGAGTGAACAGAAAGAAGAGGCAATCAGTTCCAAGCTTCAGTCCTTGCCTGAACATGTCGTGAAGATGATGCTGAAGGCGCTGAAGCTTAGCTCTGAGGAGGCCAGGCTCAAGTTTCCTCGTCTGCTGCAGCTAGTAGAAGTGTACCCTGCTGAAACCCTTGACCTGATGGTCAGAGAGGTTGTGAGTGTTCCTTGCTGGCTTTTGATTGGCTGGATCAGTCAAATGATGGCTCTGCTTGACAAGCCTCAGGCGACAGCAGTTCAGCATGTTATAGAGGAGATTGCAGAATGCTATCCACAGGCACTCATATACCCGTACATGATCAGCAGTGAGAACTACACTTTTGAGGAGTCTGCAAGTGGTCAGAGGAACCGAGAGTTTGTTGAGAAGCTGGAGTCATTATTGGATAAAGGTGGTGTCATCCAAGGGTTTGTAGATGCCCTTCAGCAACTTTCAAACCCTGAAATGCTTTTCAAGGACTGGTGGGATGAGGTGAAGAATCAACTGGACAAACCAAACCtggacaaaaagaaaatgaagctaCAATACATGACTGAATTGCTTGGAGATGCCAAGTCTCCAAGATTTGGGTCTTACAGAAGAAAGTTCATCCAGAAATTCTCTAAAGAAGTGGAGAAGCTGCTTGGTGCCGGTGGGTCTAAGTTGTATGAAAGGCGGAAGGATAAGGACTTCCTCCAACAGGTGGACCGCATGGTTCAATCCATGAGAGGTTTCCAAAAGGAACcaggcaacatgaaggaatactCACCCTGGCTAAGCAGCTTCAAAGCTGAAACTCTCAAAAATGAACTGGAGGTACCAGGTCAATATGATGGCAAATCAAAGCCATTGCCAGAATATCATGCAAAGATCACTGGTTTCGATGAAAGGGTGAAGGTTATGACATCTATCCGTCGACCGAAGCGCATCATCATACGAGGAGATGACGAGCGGGATTATCCATTCTTAGTGAAGGGTGGAGAGGATCTGCGGCAGGACCAACGCATTGAGCAGCTTTTTGGCGTGATGAACATGATTCTCAGTCAGGACACTGCCTGTTCTCAGCGGAGCCTAGCACTCCGTACCTACCAGGTCATTCCCATCACCAGCAGGATCGGTCTGATTGAGTGGATGGAGAACACTTGCACCCTGAAAGACTTCCTTTCCAGCAGAAGGACAGAACAAGAGCAGAAGACAATCACAAGGCCCAATGAATTCTATGATGAGTGGATCAGTAAAGTTGCTGGAAAGGTGGAGGGCATTAGACGATACGCTGAATTGTACAAAAAAGCAAAACGTGTGGACACTGTGAATAACTTTAGAAGAATTGAGCAGATGGTGCCGGACGACTTGTTAAAACGTGCTTTTGTGAGGATGAGCACCACACCCGAAGCCTTCCTTTCACTGAGGTCCCATTTCAGCAGTTCTCATGCTGTGCTCTGCATCAGTCACTGGATTCTGGGCATTGGTGATAGGCATCTCTCCAACTTCATGATCAATACAGAGACTGGCGGCATGATCGGCATTGACTTTGGTCATGCTTTTGGATCAGCCACTCAGTTTCTTCCAGTGCCTGAACTGATGCCGTTTAGACTGACccggcagtttataaacttgatgCGTCCCTTGGCCGAGTCTGGTCTCATCCAGAGTGTGATGGTTCACTCACTGCGAGCCTTCAGAGCTGAGCCAGACTTGCTGCTCAACACTATGGATGTGTTTGTAAAGGAGCCCTCGCTGGACTGGAAGAACTTTGAGCTGAAGCAGCTGAAGAAAGGAGGCACCTGGACAGAGAGTGTAAACACCAAAGAAATCAACTGGTTCCCTCTTCAGAAGGTCAACTTTGCTCGCCGGAAGCTTGAAGGAACCAATCCTTCAGTCATAACAAGTGAGGAGCTTTGTCTTGGATTTGAGAAGATGCCGGAGTATAAGGGACTGTTGGCTGTGGCCCGAGGAGAAGAACAACATAACATTCGAGCTCGACTTGCTGACAAAGATCTGACTGTTGAAGATCAGGTAGATTGCTTGCTTGATCAGGCAACTGACCCTAATATACTGGGCAGGGTGTGGATAGGTTGGGAACCATGGATTTGAATCCAATAGGGTATTACAAAAATCTAATTCAGTGGGGATTTCAAATCAAATTTTTTTGTATCTTTCTGAAAGTTTGTAAGTGTGTGACGATGAAGCTTTCAGAACCACAGCTATTGTCAAATAACTTTTCTATGGGTATGTTAAGCCAGAATTTAATAGGACTGTATTAAACAAAATGAAGGGAAAATAAGCAGTTGTCATTTTTCATTGCATGGATTTCAAGAATCACATTCATCAAATAAAGCATCCAAATGTTAACATTCCCCCCTTGTGGACACATCAGCTTTTAATACTGACATAAAAGTGATGCTGttagaaatattttaatttagtgtCAACTAGTATGACAACTTGATACAAGATAGACTGAATGTGATAAACTAAGTTgtcagggggaaaaaaaagctaaaatcaaGTTAATCGTTTTTATTGATCAACAACCA

Function

GO:

id name namespace
GO:0006302 double-strand break repair biological_process
GO:0006303 double-strand break repair via nonhomologous end joining biological_process
GO:0033152 immunoglobulin V(D)J recombination biological_process
GO:0033153 T cell receptor V(D)J recombination biological_process
GO:0006974 cellular response to DNA damage stimulus biological_process
GO:0030183 B cell differentiation biological_process
GO:0030217 T cell differentiation biological_process
GO:0071707 immunoglobulin heavy chain V-D-J recombination biological_process
GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage biological_process
GO:0000723 telomere maintenance biological_process
GO:0016310 phosphorylation biological_process
GO:0006281 DNA repair biological_process
GO:0005634 nucleus cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0004677 DNA-dependent protein kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
ko03450 Non-homologous end-joining
ko04110 Cell cycle
ko01001 Protein kinases
ko03032 DNA replication proteins
ko03400 DNA repair and recombination proteins

ZFIN:

id description
ZDB-GENE-030131-9008 Predicted to enable protein serine/threonine kinase activity. Acts upstream of or within B cell differentiation; T cell receptor V(D)J recombination; and immunoglobulin heavy chain V-D-J recombination. Predicted to be located in nucleolus. Predicted to be active in nucleus. Is expressed in kidney and spleen. Used to study severe combined immunodeficiency. Human ortholog(s) of this gene implicated in immunodeficiency 26. Orthologous to human PRKDC (protein kinase, DNA-activated, catalytic subunit).

Ensembl:

ensembl_id ENSDART00000051679

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00068027 lncRNA downstream 333906 41012757 ~ 41014637 (-) True XLOC_034977
TCONS_00068020 lncRNA downstream 463838 40866815 ~ 40884705 (-) True XLOC_034973
TCONS_00068018 lncRNA downstream 699697 40647210 ~ 40648846 (-) True XLOC_034971
TCONS_00068015 lncRNA downstream 717873 40627646 ~ 40630670 (-) True XLOC_034970
TCONS_00068014 lncRNA downstream 717891 40627425 ~ 40630652 (-) False XLOC_034970
TCONS_00069277 lncRNA upstream 4628 41401488 ~ 41403756 (-) False XLOC_034982
TCONS_00068034 lncRNA upstream 4631 41401491 ~ 41402246 (-) False XLOC_034982
TCONS_00068042 lncRNA upstream 94644 41491504 ~ 41495267 (-) False XLOC_034984
TCONS_00068044 lncRNA upstream 99399 41496259 ~ 41496730 (-) False XLOC_034984
TCONS_00068045 lncRNA upstream 99504 41496364 ~ 41498088 (-) True XLOC_034984
TCONS_00068031 mRNA downstream 9620 41329748 ~ 41338923 (-) True XLOC_034980
TCONS_00068030 mRNA downstream 53032 41275201 ~ 41295511 (-) True XLOC_034979
TCONS_00068029 mRNA downstream 53187 41275201 ~ 41295356 (-) False XLOC_034979
TCONS_00068028 mRNA downstream 246045 41080649 ~ 41102498 (-) True XLOC_034978
TCONS_00068025 mRNA downstream 333770 41007773 ~ 41014773 (-) False XLOC_034977
TCONS_00068033 mRNA upstream 4628 41401488 ~ 41403022 (-) False XLOC_034982
TCONS_00068035 mRNA upstream 6830 41403690 ~ 41420226 (-) False XLOC_034982
TCONS_00068037 mRNA upstream 39628 41436488 ~ 41468942 (-) False XLOC_034983
TCONS_00068038 mRNA upstream 42276 41439136 ~ 41489822 (-) False XLOC_034983
TCONS_00068039 mRNA upstream 42276 41439136 ~ 41489997 (-) False XLOC_034983
TCONS_00068023 other downstream 399353 40948875 ~ 40949190 (-) True XLOC_034975
TCONS_00068010 other downstream 797489 40538570 ~ 40551054 (-) False XLOC_034968
TCONS_00067999 other downstream 1632470 39715712 ~ 39716073 (-) True XLOC_034962
TCONS_00067983 other downstream 2113431 39234995 ~ 39235112 (-) True XLOC_034955
TCONS_00067981 other downstream 2211769 39136650 ~ 39136774 (-) True XLOC_034953
TCONS_00068036 other upstream 17730 41414590 ~ 41416307 (-) True XLOC_034982
TCONS_00068043 other upstream 96157 41493017 ~ 41493131 (-) True XLOC_034985
TCONS_00068069 other upstream 756550 42153410 ~ 42153524 (-) True XLOC_034997
TCONS_00068070 other upstream 894118 42290978 ~ 42291094 (-) True XLOC_034998
TCONS_00068072 other upstream 1415195 42812055 ~ 42812169 (-) True XLOC_035002

Expression Profile

//

Homologous

species RNA id representative length rna type GC content exon number chromosome id location
grasscarp (Ctenopharyngodon idella) CI01000026_12591049_12624688.mRNA True 13795 mRNA 0.45 79 CI01000026 12590785 ~ 12626438 (-)