RNA id: TU244145


Basic Information

Item Value
RNA id TU244145
length 217
lncRNA type intronic
GC content 0.49
exon number 3
gene id G180217
representative True

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 34904361 ~ 34913338 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtctgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtgtatgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtatgtgtgtgtctctgtgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU244198 lncRNA upstream 1533 34901991 ~ 34902828 (+) True G180257
TU244147 lncRNA upstream 7717 34870348 ~ 34896644 (+) True G180219
TU244134 lncRNA upstream 33592 34824170 ~ 34870769 (+) False G180212
TU244130 lncRNA upstream 46037 34855158 ~ 34858324 (+) True G180212
TU244185 lncRNA upstream 56178 34806025 ~ 34848183 (+) True G180246
TU244250 lncRNA downstream 44970 34958308 ~ 34958827 (+) True G180271
TU244252 lncRNA downstream 51699 34965037 ~ 34965484 (+) True G180273
TU244253 lncRNA downstream 52274 34965612 ~ 34968768 (+) True G180274
TU244259 lncRNA downstream 73812 34987150 ~ 34987669 (+) True G180278
TU244261 lncRNA downstream 77789 34991127 ~ 35022075 (+) True G180280
XM_039779578.1 mRNA upstream 52757 34850601 ~ 34851604 (+) True si:ch211-202f5.2
XM_039779491.1 mRNA upstream 107183 34777854 ~ 34797178 (+) True fktn
XM_039779456.1 mRNA upstream 549005 34332321 ~ 34355356 (+) True wdr36
XM_039779485.1 mRNA upstream 575098 34318618 ~ 34329263 (+) True slc25a46
XM_039779572.1 mRNA upstream 596383 34300493 ~ 34307978 (+) True slc31a1
XM_039779566.1 mRNA downstream 31637 34944975 ~ 34948439 (+) False LOC120545317
XM_039779455.1 mRNA downstream 73332 34986670 ~ 35023782 (+) True LOC120545265
XM_039779470.1 mRNA downstream 221133 35134471 ~ 35143485 (+) True LOC120545273
XM_039779469.1 mRNA downstream 291743 35205081 ~ 35232148 (+) True LOC120545272
XM_039779472.1 mRNA downstream 346858 35260196 ~ 35608119 (+) False LOC120545274
TU244144 other upstream 89451 34807258 ~ 34814910 (+) True G180216
TU244135 other upstream 100770 34716286 ~ 34803591 (+) False G180213
TU244088 other upstream 338409 34564880 ~ 34565952 (+) True G180201
TU244084 other upstream 343976 34557582 ~ 34560385 (+) True G180199
TU244006 other upstream 576048 34318648 ~ 34328313 (+) False slc25a46
TU244245 other downstream 39726 34953064 ~ 34955966 (+) True G180268
TU244390 other downstream 937584 35850922 ~ 36018072 (+) False G180366
TU244424 other downstream 1056428 35969766 ~ 35973061 (+) True G180382
TU244438 other downstream 1144968 36058306 ~ 36058736 (+) False LOC120545305
TU244460 other downstream 1209742 36123080 ~ 36125385 (+) False G180410

Expression Profile