RNA id: TU244134


Basic Information

Item Value
RNA id TU244134
length 700
lncRNA type read_through
GC content 0.50
exon number 3
gene id G180212
representative False

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 34614460 ~ 34941011 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cacaaacacacacacacagacacacacacacacacacacacagacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacagacacacacacacacacaaacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacagacacacacacagacacacacacacacacacacacacacagacacacacacagacacacacacacacacacacacacacacacacagacacacacacagacagacacacacacacacacacacacacacagacagacagacagacacacacacagacacacacacagacacacacacagacagacacacacacacacacacacacacacacacacacacacagacagacagaacacacagacagacagacagacagacagacagacagacagacagacagacagacacacacacacacagacagacagacagacagacagacagacagacacacacacacacacacacacacaacgcacacacagacacacacacacacacacacagacagaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU244138 lncRNA upstream 20420 34716286 ~ 34803750 (+) False G180213
TU244136 lncRNA upstream 20579 34800607 ~ 34803591 (+) False G180213
TU244137 lncRNA upstream 20579 34800607 ~ 34803591 (+) False G180213
TU244139 lncRNA upstream 20579 34800607 ~ 34803591 (+) False G180213
TU244140 lncRNA upstream 20579 34800607 ~ 34803591 (+) True G180213
TU244142 lncRNA downstream 30260 34901029 ~ 34913162 (+) True G180215
TU244198 lncRNA downstream 31222 34901991 ~ 34902828 (+) True G180257
TU244145 lncRNA downstream 33592 34904361 ~ 34913338 (+) True G180217
TU244250 lncRNA downstream 87539 34958308 ~ 34958827 (+) True G180271
TU244252 lncRNA downstream 94268 34965037 ~ 34965484 (+) True G180273
XM_039779491.1 mRNA upstream 26992 34777854 ~ 34797178 (+) True fktn
XM_039779456.1 mRNA upstream 468814 34332321 ~ 34355356 (+) True wdr36
XM_039779485.1 mRNA upstream 494907 34318618 ~ 34329263 (+) True slc25a46
XM_039779572.1 mRNA upstream 516192 34300493 ~ 34307978 (+) True slc31a1
XM_039779566.1 mRNA downstream 74206 34944975 ~ 34948439 (+) False LOC120545317
XM_039779455.1 mRNA downstream 115901 34986670 ~ 35023782 (+) True LOC120545265
XM_039779470.1 mRNA downstream 263702 35134471 ~ 35143485 (+) True LOC120545273
XM_039779469.1 mRNA downstream 334312 35205081 ~ 35232148 (+) True LOC120545272
XM_039779472.1 mRNA downstream 389427 35260196 ~ 35608119 (+) False LOC120545274
TU244144 other upstream 9260 34807258 ~ 34814910 (+) True G180216
TU244135 other upstream 20579 34716286 ~ 34803591 (+) False G180213
TU244088 other upstream 258218 34564880 ~ 34565952 (+) True G180201
TU244084 other upstream 263785 34557582 ~ 34560385 (+) True G180199
TU244008 other upstream 495857 34318593 ~ 34328313 (+) False slc25a46
TU244245 other downstream 82295 34953064 ~ 34955966 (+) True G180268
TU244390 other downstream 980153 35850922 ~ 36018072 (+) False G180366
TU244424 other downstream 1098997 35969766 ~ 35973061 (+) True G180382
TU244438 other downstream 1187537 36058306 ~ 36058736 (+) False LOC120545305
TU244460 other downstream 1252311 36123080 ~ 36125385 (+) False G180410

Expression Profile