RNA id: TCONS_00070895


Basic Information

Item Value
RNA id TCONS_00070895
length 766
RNA type mRNA
GC content 0.45
exon number 4
gene id XLOC_036268
representative True

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 13453219 ~ 13454281 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CCTCTTGAAGTTGCACTTCTCATCCTCGCCCATGGAGTATCCAGCGTTCCAGAAATAATCCAGCTTCTGGACTGGCAGGACCAGGAGGACCATTATATAATGGTGTTGGAATACCCTTCACCCTGTGAGGACCTATATGCTTTCACAGAAAGCTATGGAGGATCCATAAGTGAAGGTTTAGCGCGTGTTGTTATGCAGCAGGCAACTCAAGCTGCATACATGTGCTGCCGCAATGGTGTTCTACATCGCGATATCAAACTTGAAAATCTACTAATCAACAAGGAGACTCATAAAGTCAAATTAATAGACTTTGGGTGTGGAGACCTTCTCAAGAAATTACCCTACGATACATTTGCCGGCACCCTTGAGTACTGCCCCCCAGAGTTTGAGGAAACGGGTGAATACAATGGGAAGCCGGCAACAGTCTGGTCCCTTGGCATCCTCTTGTTCGTATTGGTGTGTGAGGACTTTCCCAACCCTCAAGAACTGCACATGATCAATGAGAACAACTTCTCCAAAGCTGGCTTGTCCGATGAATGCTGTCAGTTGATTAGTTGCTGTCTCCAGCAAAAGCCAGAGCAGCGGATTCAATTAAAAGAGATTCTTCTCCACGAATGGTTCAAGgacaCCAACCTGGAGAACTGAAGAACAGCCACCCTACATGTTATTGTCTTGAGAGGAACGTTTCAGGCTGTTTGAGGCAAGAAATCTTGAGCAGGAGGTGGCTCCtctcaaaacaaacaataaaatatatgcaTTAATTGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000141959

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00072406 lncRNA downstream 147171 13302679 ~ 13306048 (-) True XLOC_036263
TCONS_00072405 lncRNA downstream 605733 12845269 ~ 12847486 (-) True XLOC_036254
TCONS_00072404 lncRNA downstream 742995 12686691 ~ 12710224 (-) True XLOC_036253
TCONS_00072010 lncRNA downstream 783807 12452086 ~ 12669412 (-) False XLOC_036251
TCONS_00072009 lncRNA downstream 784106 12451451 ~ 12669113 (-) False XLOC_036251
TCONS_00070904 lncRNA upstream 212146 13666427 ~ 13678415 (-) False XLOC_036276
TCONS_00072011 lncRNA upstream 260661 13714942 ~ 13716577 (-) True XLOC_036277
TCONS_00070911 lncRNA upstream 516609 13970890 ~ 13972558 (-) True XLOC_036280
TCONS_00070916 lncRNA upstream 575640 14029921 ~ 14043884 (-) False XLOC_036283
TCONS_00070929 lncRNA upstream 717795 14172076 ~ 14179774 (-) False XLOC_036290
TCONS_00070894 mRNA downstream 10348 13441808 ~ 13442871 (-) True XLOC_036267
TCONS_00070893 mRNA downstream 24479 13427678 ~ 13428740 (-) True XLOC_036266
TCONS_00070892 mRNA downstream 34170 13417986 ~ 13419049 (-) True XLOC_036265
TCONS_00070890 mRNA downstream 88340 13351698 ~ 13364879 (-) False XLOC_036264
TCONS_00070891 mRNA downstream 90462 13351704 ~ 13362757 (-) True XLOC_036264
TCONS_00070896 mRNA upstream 16574 13470855 ~ 13471916 (-) True XLOC_036269
TCONS_00070897 mRNA upstream 30915 13485196 ~ 13486258 (-) True XLOC_036270
TCONS_00070898 mRNA upstream 80104 13534385 ~ 13541514 (-) True XLOC_036271
TCONS_00070899 mRNA upstream 118250 13572531 ~ 13574764 (-) True XLOC_036272
TCONS_00070900 mRNA upstream 143124 13597405 ~ 13600274 (-) True XLOC_036273
TCONS_00070885 other downstream 214127 13238973 ~ 13239092 (-) True XLOC_036261
TCONS_00070876 other downstream 440392 12998252 ~ 13012827 (-) False XLOC_036256
TCONS_00070870 other downstream 784128 12521352 ~ 12669091 (-) True XLOC_036251
TCONS_00070869 other downstream 784654 12465299 ~ 12668565 (-) False XLOC_036251
TCONS_00070909 other upstream 423447 13877728 ~ 13877845 (-) True XLOC_036279
TCONS_00070922 other upstream 638513 14092794 ~ 14094516 (-) True XLOC_036286
TCONS_00070936 other upstream 960072 14414353 ~ 14451783 (-) False XLOC_036294
TCONS_00070951 other upstream 1838086 15292367 ~ 15305523 (-) True XLOC_036304
TCONS_00070954 other upstream 2178451 15632732 ~ 15632847 (-) True XLOC_036307

Expression Profile

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