Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00071178 |
| length | 1052 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 8 |
| gene id | XLOC_036416 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007119.7 |
| NCBI id | CM002892.2 |
| chromosome length | 54304671 |
| location | 22521729 ~ 22542545 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0003676 | nucleic acid binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-8623 | Predicted to enable nucleic acid binding activity. Orthologous to human CSDE1 (cold shock domain containing E1). |
| ensembl_id | ENSDART00000144041 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00072450 | lncRNA | downstream | 56364 | 22405875 ~ 22474642 (-) | True | XLOC_036413 |
| TCONS_00072449 | lncRNA | downstream | 96896 | 22384742 ~ 22434110 (-) | True | XLOC_036411 |
| TCONS_00072448 | lncRNA | downstream | 102987 | 22383250 ~ 22428019 (-) | True | XLOC_036410 |
| TCONS_00071168 | lncRNA | downstream | 187784 | 22341606 ~ 22343222 (-) | True | XLOC_036409 |
| TCONS_00071167 | lncRNA | downstream | 187803 | 22341606 ~ 22343203 (-) | False | XLOC_036409 |
| TCONS_00072451 | lncRNA | upstream | 323416 | 22862004 ~ 22867103 (-) | True | XLOC_036421 |
| TCONS_00072452 | lncRNA | upstream | 582925 | 23121513 ~ 23123787 (-) | False | XLOC_036425 |
| TCONS_00072033 | lncRNA | upstream | 596112 | 23134700 ~ 23136454 (-) | False | XLOC_036426 |
| TCONS_00072032 | lncRNA | upstream | 596112 | 23134700 ~ 23136454 (-) | False | XLOC_036426 |
| TCONS_00072034 | lncRNA | upstream | 597094 | 23135682 ~ 23137249 (-) | False | XLOC_036426 |
| TCONS_00071171 | mRNA | downstream | 15964 | 22509508 ~ 22515042 (-) | False | XLOC_036415 |
| TCONS_00071172 | mRNA | downstream | 16088 | 22510807 ~ 22514918 (-) | True | XLOC_036415 |
| TCONS_00071170 | mRNA | downstream | 22951 | 22499362 ~ 22508055 (-) | True | XLOC_036414 |
| TCONS_00071169 | mRNA | downstream | 136346 | 22393908 ~ 22394660 (-) | True | XLOC_036412 |
| TCONS_00071163 | mRNA | downstream | 204262 | 22297813 ~ 22326744 (-) | False | XLOC_036408 |
| TCONS_00071181 | mRNA | upstream | 5702 | 22544290 ~ 22558773 (-) | True | XLOC_036417 |
| TCONS_00071182 | mRNA | upstream | 28775 | 22567363 ~ 22739757 (-) | False | XLOC_036418 |
| TCONS_00071183 | mRNA | upstream | 79916 | 22618504 ~ 22639794 (-) | False | XLOC_036418 |
| TCONS_00071184 | mRNA | upstream | 79916 | 22618504 ~ 22660678 (-) | False | XLOC_036418 |
| TCONS_00071185 | mRNA | upstream | 79916 | 22618504 ~ 22739757 (-) | False | XLOC_036418 |
| TCONS_00071166 | other | downstream | 188685 | 22341606 ~ 22342321 (-) | False | XLOC_036409 |
| TCONS_00071164 | other | downstream | 204303 | 22320847 ~ 22326703 (-) | False | XLOC_036408 |
| TCONS_00071158 | other | downstream | 243795 | 22284294 ~ 22287211 (-) | False | XLOC_036407 |
| TCONS_00071115 | other | downstream | 1587234 | 20940459 ~ 20943772 (-) | True | XLOC_036389 |
| TCONS_00071108 | other | downstream | 1686504 | 20842134 ~ 20844502 (-) | True | XLOC_036384 |
| TCONS_00071192 | other | upstream | 227868 | 22766456 ~ 22783222 (-) | False | XLOC_036419 |
| TCONS_00071194 | other | upstream | 306112 | 22844700 ~ 22845798 (-) | True | XLOC_036420 |
| TCONS_00071201 | other | upstream | 583563 | 23122151 ~ 23122372 (-) | False | XLOC_036425 |
| TCONS_00071202 | other | upstream | 584174 | 23122762 ~ 23122874 (-) | True | XLOC_036425 |
| TCONS_00071249 | other | upstream | 2504613 | 25043201 ~ 25044808 (-) | True | XLOC_036463 |
