Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00073264 |
| length | 1362 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 11 |
| gene id | XLOC_037226 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007120.7 |
| NCBI id | CM002893.2 |
| chromosome length | 56459846 |
| location | 30387916 ~ 30392745 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:1905332 | positive regulation of morphogenesis of an epithelium | biological_process |
| GO:0016567 | protein ubiquitination | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0061630 | ubiquitin protein ligase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-070912-408 | Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in protein ubiquitination. Predicted to be active in cytoplasm. Orthologous to human RNF39 (ring finger protein 39). |
| ensembl_id | ENSDART00000112827 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00073262 | lncRNA | upstream | 79798 | 30294073 ~ 30308132 (+) | False | XLOC_037225 |
| TCONS_00075147 | lncRNA | upstream | 122507 | 30264357 ~ 30265423 (+) | True | XLOC_037223 |
| TCONS_00075146 | lncRNA | upstream | 138506 | 30248495 ~ 30249424 (+) | True | XLOC_037222 |
| TCONS_00075145 | lncRNA | upstream | 232650 | 30154784 ~ 30155280 (+) | True | XLOC_037219 |
| TCONS_00073246 | lncRNA | upstream | 693731 | 29690678 ~ 29694199 (+) | True | XLOC_037214 |
| TCONS_00073266 | lncRNA | downstream | 29027 | 30421527 ~ 30424581 (+) | False | XLOC_037227 |
| TCONS_00073277 | lncRNA | downstream | 302783 | 30695283 ~ 30716906 (+) | True | XLOC_037232 |
| TCONS_00075148 | lncRNA | downstream | 683480 | 31075980 ~ 31156228 (+) | False | XLOC_037235 |
| TCONS_00075149 | lncRNA | downstream | 872374 | 31264874 ~ 31269143 (+) | False | XLOC_037236 |
| TCONS_00075150 | lncRNA | downstream | 872863 | 31265363 ~ 31269143 (+) | True | XLOC_037236 |
| TCONS_00073261 | mRNA | upstream | 71140 | 30294096 ~ 30316790 (+) | True | XLOC_037225 |
| TCONS_00073258 | mRNA | upstream | 99484 | 30274637 ~ 30288446 (+) | False | XLOC_037224 |
| TCONS_00073259 | mRNA | upstream | 99484 | 30275139 ~ 30288446 (+) | True | XLOC_037224 |
| TCONS_00073256 | mRNA | upstream | 174259 | 30211038 ~ 30213671 (+) | False | XLOC_037221 |
| TCONS_00073257 | mRNA | upstream | 174259 | 30213144 ~ 30213671 (+) | True | XLOC_037221 |
| TCONS_00073265 | mRNA | downstream | 28989 | 30421489 ~ 30427117 (+) | False | XLOC_037227 |
| TCONS_00073267 | mRNA | downstream | 29126 | 30421626 ~ 30426582 (+) | True | XLOC_037227 |
| TCONS_00073268 | mRNA | downstream | 72141 | 30464641 ~ 30477311 (+) | False | XLOC_037228 |
| TCONS_00073269 | mRNA | downstream | 83063 | 30475563 ~ 30477311 (+) | True | XLOC_037228 |
| TCONS_00073270 | mRNA | downstream | 86268 | 30478768 ~ 30490414 (+) | True | XLOC_037229 |
| TCONS_00073260 | other | upstream | 83600 | 30294073 ~ 30304330 (+) | False | XLOC_037225 |
| TCONS_00073244 | other | upstream | 709678 | 29676902 ~ 29678252 (+) | False | XLOC_037213 |
| TCONS_00073240 | other | upstream | 732932 | 29642857 ~ 29654998 (+) | False | XLOC_037211 |
| TCONS_00073237 | other | upstream | 753576 | 29616854 ~ 29634354 (+) | False | XLOC_037210 |
| TCONS_00073239 | other | upstream | 761651 | 29616928 ~ 29626279 (+) | True | XLOC_037210 |
| TCONS_00073279 | other | downstream | 427790 | 30820290 ~ 31015326 (+) | False | XLOC_037234 |
| TCONS_00073282 | other | downstream | 683556 | 31076056 ~ 31166402 (+) | False | XLOC_037235 |
| TCONS_00073288 | other | downstream | 1103148 | 31495648 ~ 31495765 (+) | True | XLOC_037239 |
| TCONS_00073291 | other | downstream | 1173899 | 31566399 ~ 31572679 (+) | True | XLOC_037241 |
| TCONS_00073294 | other | downstream | 1600811 | 31993311 ~ 31993433 (+) | True | XLOC_037244 |
