RNA id: TCONS_00073801


Basic Information

Item Value
RNA id TCONS_00073801
length 746
RNA type processed_transcript
GC content 0.38
exon number 2
gene id XLOC_037566
representative True

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 1952956 ~ 1955923 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CCGTGTCTTTATTTCCTCCTGAGATCAGAGTAATCGCCATTATTGAATAAGTGCAACTTTCAGGATTATTTATGGCACCCGCGCGCTGTCATGAATGGCTGTGGGGAAGCACGTGATACCATTAAACTTTGTTTTATGGCCAGGGAGTTGACAAGCCAAAATATAATTCACATTGTATATTAGAAAGGTCGTTCAGACGGTTTTAGAAAAGATCCCAGCATCGCCGCCGAGGAAAGACGCTCCACGCGTATTTTGATCATGGATATACAAATTTGCCGATGCGTTTTTGGAGATACGCCTGCTTCTGGAGTTTTGAGACCACCTGATCAATTTGCTTGCCATGGCACATCACAGAGTGAGTAGCATGTACGTCTTCAATCCTCACCTGGCGGATTATGATTTCAgttgtacttgtgtgtgtgtgtgtgtgtgttttttttttttttttttttttagatttatcgAATGAACAAATTATTTAGTTATAATTAGTAGTCGGATTTAAATATTAGGTCTGAGACATAATGCTATGAGAGAGCTCCTTCTGAAAATATGTCTTCGCTATGGAACATGTTGGGtattataatagattttttaagcACCACGAGTACCATGGACATGATATTAAATTTCATGAAAACCTAAGAGAAAACAGTTTAATGGCTTAATTGTACGTTGAGAAATTAAGCCTTTTTTCTCGATATTTTTGGTCAGTTGGTGAATATATGCCGTCGTCTATATATACC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000140438

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00075276 lncRNA downstream 16852 1931428 ~ 1936169 (-) False XLOC_037564
TCONS_00075275 lncRNA downstream 16852 1931428 ~ 1936169 (-) False XLOC_037564
TCONS_00075274 lncRNA downstream 17174 1931428 ~ 1935847 (-) False XLOC_037564
TCONS_00075273 lncRNA downstream 19149 1931428 ~ 1933872 (-) False XLOC_037564
TCONS_00073787 lncRNA downstream 303277 1642605 ~ 1649744 (-) False XLOC_037561
TCONS_00075277 lncRNA upstream 194999 2150922 ~ 2171296 (-) False XLOC_037572
TCONS_00075278 lncRNA upstream 194999 2150922 ~ 2173197 (-) True XLOC_037572
TCONS_00074958 lncRNA upstream 224596 2180519 ~ 2207258 (-) True XLOC_037573
TCONS_00075279 lncRNA upstream 279970 2235893 ~ 2277636 (-) True XLOC_037574
TCONS_00074959 lncRNA upstream 426418 2382341 ~ 2389808 (-) True XLOC_037576
TCONS_00073799 mRNA downstream 1877 1948465 ~ 1951144 (-) True XLOC_037565
TCONS_00073797 mRNA downstream 3106 1937686 ~ 1949915 (-) False XLOC_037565
TCONS_00073795 mRNA downstream 13789 1937049 ~ 1939232 (-) False XLOC_037565
TCONS_00073790 mRNA downstream 249220 1693369 ~ 1703801 (-) False XLOC_037562
TCONS_00073802 mRNA upstream 8082 1964005 ~ 1965727 (-) True XLOC_037567
TCONS_00073803 mRNA upstream 11784 1967707 ~ 1970071 (-) True XLOC_037568
TCONS_00073804 mRNA upstream 19895 1975818 ~ 1978090 (-) True XLOC_037569
TCONS_00073805 mRNA upstream 25959 1981882 ~ 1984604 (-) False XLOC_037570
TCONS_00073806 mRNA upstream 25959 1981882 ~ 1986014 (-) True XLOC_037570
TCONS_00073794 other downstream 18935 1931440 ~ 1934086 (-) True XLOC_037564
TCONS_00073793 other downstream 203985 1748919 ~ 1749036 (-) True XLOC_037563
TCONS_00073788 other downstream 308260 1644683 ~ 1644761 (-) True XLOC_037561
TCONS_00073777 other downstream 573531 1379376 ~ 1379490 (-) True XLOC_037555
TCONS_00073774 other downstream 949466 1003441 ~ 1003555 (-) True XLOC_037549
TCONS_00073808 other upstream 270540 2226463 ~ 2277492 (-) False XLOC_037574
TCONS_00073809 other upstream 374938 2330861 ~ 2337303 (-) True XLOC_037575
TCONS_00073827 other upstream 1534908 3490831 ~ 3496579 (-) True XLOC_037591
TCONS_00073830 other upstream 1552395 3508318 ~ 3519711 (-) True XLOC_037592
TCONS_00073841 other upstream 2487995 4443918 ~ 4447104 (-) True XLOC_037598

Expression Profile

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