Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00073818 |
| length | 975 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 7 |
| gene id | XLOC_037582 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007120.7 |
| NCBI id | CM002893.2 |
| chromosome length | 56459846 |
| location | 2879763 ~ 2892250 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:1902036 | regulation of hematopoietic stem cell differentiation | biological_process |
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0042127 | regulation of cell population proliferation | biological_process |
| GO:0048538 | thymus development | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003674 | molecular_function | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050417-29 | Acts upstream of or within regulation of hematopoietic stem cell differentiation and thymus development. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Is expressed in several structures, including digestive system; nervous system; neural tube; thymus; and ventral wall of dorsal aorta. Human ortholog(s) of this gene implicated in immunodeficiency-centromeric instability-facial anomalies syndrome 3. Orthologous to human CDCA7 (cell division cycle associated 7). |
| ensembl_id | ENSDART00000137201 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00074960 | lncRNA | downstream | 18842 | 2861221 ~ 2866454 (-) | True | XLOC_037581 |
| TCONS_00073816 | lncRNA | downstream | 18889 | 2861221 ~ 2866407 (-) | False | XLOC_037581 |
| TCONS_00075282 | lncRNA | downstream | 104473 | 2777346 ~ 2780823 (-) | False | XLOC_037580 |
| TCONS_00075281 | lncRNA | downstream | 104473 | 2777346 ~ 2780823 (-) | True | XLOC_037580 |
| TCONS_00073813 | lncRNA | downstream | 312505 | 2568344 ~ 2572791 (-) | True | XLOC_037578 |
| TCONS_00075283 | lncRNA | upstream | 238643 | 3130688 ~ 3132168 (-) | True | XLOC_037585 |
| TCONS_00073824 | lncRNA | upstream | 261681 | 3153726 ~ 3154286 (-) | True | XLOC_037587 |
| TCONS_00075284 | lncRNA | upstream | 373523 | 3265568 ~ 3280451 (-) | True | XLOC_037588 |
| TCONS_00075285 | lncRNA | upstream | 466352 | 3358397 ~ 3395521 (-) | False | XLOC_037589 |
| TCONS_00075286 | lncRNA | upstream | 482590 | 3374635 ~ 3395254 (-) | False | XLOC_037589 |
| TCONS_00073815 | mRNA | downstream | 290832 | 2592392 ~ 2594464 (-) | True | XLOC_037579 |
| TCONS_00073814 | mRNA | downstream | 290886 | 2591968 ~ 2594410 (-) | False | XLOC_037579 |
| TCONS_00073810 | mRNA | downstream | 312175 | 2560219 ~ 2573121 (-) | False | XLOC_037578 |
| TCONS_00073819 | mRNA | upstream | 3964 | 2896009 ~ 2945008 (-) | False | XLOC_037583 |
| TCONS_00073820 | mRNA | upstream | 4858 | 2896903 ~ 2936017 (-) | True | XLOC_037583 |
| TCONS_00073821 | mRNA | upstream | 57227 | 2949272 ~ 3034125 (-) | False | XLOC_037584 |
| TCONS_00073822 | mRNA | upstream | 57556 | 2949601 ~ 3034064 (-) | True | XLOC_037584 |
| TCONS_00073823 | mRNA | upstream | 243017 | 3135062 ~ 3149896 (-) | True | XLOC_037586 |
| TCONS_00073809 | other | downstream | 547993 | 2330861 ~ 2337303 (-) | True | XLOC_037575 |
| TCONS_00073808 | other | downstream | 607804 | 2226463 ~ 2277492 (-) | False | XLOC_037574 |
| TCONS_00073798 | other | downstream | 925744 | 1938985 ~ 1959552 (-) | False | XLOC_037565 |
| TCONS_00073827 | other | upstream | 598786 | 3490831 ~ 3496579 (-) | True | XLOC_037591 |
| TCONS_00073830 | other | upstream | 616273 | 3508318 ~ 3519711 (-) | True | XLOC_037592 |
| TCONS_00073841 | other | upstream | 1551873 | 4443918 ~ 4447104 (-) | True | XLOC_037598 |
| TCONS_00073868 | other | upstream | 3517112 | 6409157 ~ 6409271 (-) | True | XLOC_037613 |
| TCONS_00073875 | other | upstream | 3825632 | 6717677 ~ 6717801 (-) | True | XLOC_037618 |
