RNA id: XM_039799709.1


Basic Information

Item Value
RNA id XM_039799709.1
length 6342
RNA type mRNA
GC content 0.48
exon number 29
gene id kif5aa
representative False

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 26325890 ~ 26348279 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CACCGATAGACGGCGCTGTGGCGACCAAAGCAGGCCAAACATCCGCAGCTTTACCTCACTGCCCTTCCAGCAGCATCTCACCTTCAACCGGCCTGACGCACATCCACCGCCGCACccgaaaaggaaaagaaaaacacgaGAGAAAGACAGCgtcaaacaaaccaacaatTGAAAACGAGCAACAGCAGAGTcggggttttatttttcaatgatGTAGGGGATCGTTTTGCGGTTTGACATCTAATTTCAGTCTGCCAGCCTCTCTGCGACACGGAAACACCATCCAGCTGCGCATAAATAAATTGCATCCTCTCGCAGCTTTGTCAGGATAAAACCATCCAACCTCTCCACCGTCCTCAGAATCCCCTCGACGTAGAAGGACTAAGTCACTGCGCATCCCTCCTCGTTTATTTTGACGGTCAGATCAGGCCCCGATCAGCGACGGGTCGCCTCCAGCCTCGGCAGCATCTCTCCTCTCAGAAAGCAGCATCCTTCCACCTTGAATCTGCGCAATGGCCGATATTCCAGCGGAGTGTAACATAAAAGTGTTGTGTCGCTTTCGTCCTCTCAACCAGTCAGAGATTCTACGTGGGGACCAGTTTATCCCCAAATTCCAATCAGACGATACTGTCGTCGTCGGGGGGAAGTCCTACGTGTTTGATCGAGTGTTTCCGACCAACACCACCCAGGAGCAGGTGTACAACACCTGTGCCAAGCAGATTGTCAAGGATGTTCTGGGTGGATACAATGGCACTATCTTCGCATATGGACAAACCTCCTCCGGGAAGACTCACACCATGGAGGGCAAGCTGCATGACCCTCACCAAATGGGCATCATTCCTCGCATCGCTGAGGATATTTTCAACCACATCTTTGCCATGGATGAAAACCTGGAATTCCACATCAAGGTGTCATATTTTGAAATCTACATGGACAAAATCCGTGACCTTCTGGATGtGACAAAGACCAACCTGTCTGTCCATGAGGATAAGAATAGGGTGCCATACGTCAAGGGATGCACTGAGCGTTTTGTCTCCAGCCCTGATGAGGTTATGGATGTGATCGATGAAGGCAAAGCTGCCCGCCATGTTGCTGTGACCAACATGAACGAGCACAGTTCTCGCAGCCACAGCATCTTCCTGATCAACATTAAGCAGGAGCATGTGGAGACTGAGCAGAAGCTGTGTGGAAAGCTGTACCTGGTGGATCTGGCTGGCAGTGAGAAGGTCAGTAAGACTGGAGCTGCAGGAGCCGTCCTGGATGAGGCTAAAAACATCAACAAATCTCTTTCTGCTCTGGGAAATGTCATCTCCGCGTTGGCTGAGGGCACGAAAAGTCACGTACCGTACCGTGACAGCAAAATGACCCGCATCCTGCAGGACTCCCTCGGTGGGAACTGTCGCACCACCATGTTCatctgctgctctccctccagCTACAACGATGCCGAGACCAAATCCACTCTAATGTTTGGACAACGCGCCAAGACCATCAGGAACACCGCCTCCATCAACCTGGAGCTGACGGCGGAGCAGTGGAAGAGGAAGTacgagaaagagaaggagaagaacAAGACTCTGAAGGAAACCGTCCAGAAGCTGGAGATTGAGCTCAACCGCTGGAGAAATGGAGAGGAGGTGCCTGAGACGGAGCAGACCACGGCAGACGTGGTGACCCGTTTTGAGACCGTGGAGGAGCGTCCCATTTTGGACAACGACACCTCCTCCATTGTGGTTCGCATTTCCGAGGAGGAGCGGCAGAAGTACGAGGAGGAGATACGCAAGCTCTACAAGCAGCTGGATGATAAGGATGATGAGATCAACCTGCAGTGCCAGTTGGTGGAGAAACTGAAGCAGCAGATGCTGGACCAGGATGAGCTCTTAGCCTCATCCAAGGGCGATGGGGACAAGGTCCAGGCTGAACTCGGCAGGCTTCAGGTGGAGAGCGACTGCGCCAAGGCTGAGGTGAAGGAGGTGCTGCAGGCTCTGGAGGAGCTTGCCATCAACTACGACCAGAAGAGCCAGGAGGTGGAGGAGAAAGGCCTGCagaaccagctgctggctgacCAACTGTCCCAGAAAATGGCCAGTCTGATGGAGCTGGAGGCAGAGCTGTCTCGTATGCAGGAAGTGAGCGGGCAGCAGAGGAAACGCATTGCTGACGTCCTCAACGGTCTGATGAGGGACCTCAGTGAGTTCAGCACCATCGTGGGCAACGGGGAGATCAAGCTGCCGGTGGAGATTAGCGGCGCGATCGAAGAAGAGTTCACGGTGGCTCGCCTCTACATCAGCAAGATCAAGTCTGAGGTGAAGAGCATGGTGAAGCGCTGCCGCCAGCTGGAGAACATGCAGCTGGAGTGCCACCGCAAGATGGAGGAAACTGGGAGGGAGCTCTCCTCATGCCAGCTCCTCATCTCCCAGCATGAAGCTAAGATTCGCTCCCTGACAGAGTACATGCAGAGTGTGGAGCAGAAGAAGCGGCTGCTGGAGGAGAGCCACGACTCCCTGAGCGAAGAGCTGGCCAAGCTGCAAGACCAGGATAACTCCTTGCTTGaggagaaggatggagagaaggGTGAGACTGAGGATGGAAATGTGAAGAAGGTTTCCCGTCAGCAGGAGTCTCACCGTGGCCTCCATCACAAGCAGCTGGCCCGCCTGCGGGATGAGATCAACGAGAAGCAGAGGATCATTGACGAGCTCACTGATCGTAACTCCAagctggagctggagctggCTCATGTTCGCGCCGACTTTGAACGCCTGAAGAGTCAGGACAACACTAAGAGTGAGCGTCTGGAGGAGCTCTCATTCCTGCATGAGCGCCATGAGCAGACTAAACAGGACTTGAAGGGTCTGGAGGAGACTGTCGCCCGCGAACTCCAGACCCTCCACAACCTGCGCAAGCTGTTCGTTCAAGACCTCACGTCGCGGGTTAAAAAAAGTTCCGAAATGGAGCCTGATGATAGCGGGGGGTCTTGCACCCAGAAGCAGAAGATTTCCTTTCTTGAGAATAACCTGGACCAACTTACAAAGGTTCACAAACAGattCCAATTTTCCCACCCTGTGTCATTTCTcacccctccctctgtctctctcccttccaGCTGGTACGTGACAATGCAGATCTGCGCTGTGAGCttccaaagttggagaaacgtCTTCGGTCTACTGCTGAGAGAGTTAAGGCCCTGGAGACTGCACTGAGGGATGCCAAGGAGGGCGCAATGATGGACCGCCGCCGCTACCAGCAGGAGGTCGACCGCATCAAGGACGCCATGCGGGCAAAGAGCGCCCTGAGGCGCCCCCATGCAGCACAGATCGCTAAGCCAGTGAGACCGAAGCAGATGCCCGTCTGCTCTCCCACCAACCCGTTCTACACTTACATCCGTGCCACTGAACAGGCCAACACCTACAGCAATGCCCTCTTCCAGGGCAACGTGACACAGCCGAGCGCCGCCAGCTCAAACTGCATCCCCAACTCTGTCCAGAGCAACACAGTTTCCACAGCGCTGGGCTACAGAGCAGGCAGATATACTGGAGACATACTGGAGTCCTTCCCACTCAACATTGACAACGCAGGTAACAGTATCAGTGAAACGAGAGACATCAATGACAACAGTGATGTTCACTGTGGCAGCGAGGTGGATGATTCAAACAGGCACTACATCATTCAGCAGGAGACCGCCGCAAGTTAATGCCATGATGACCAAACACTGTACCCGTCCACGGACCCTCCCCTTCCATCTGCATGCAGCCTGTCTCCCCCGTCCCTCCACTGCATcactgatgaagatgatgatgaagatctGTAGCCCTGTAGTCTTCAAACTAGATGAAGCCCCTCCAGCTCCTTTGGTGACCACTATGACCCTTAGGTTTGGGGTCCAGTCCCTTCCAGTTCAGTCAGTAGAGGAAGTAAATTAAatcagaatttgtttttttttaaatacagaacTTCACTTAATCAACTCATTGATCTCTCTGCCAATCAATTTGTCACCAGATCAAGCATCACTGATGCTGATTACCTCCTGAGGTGGTTGAGCTGAGACGGGACTAACTCCATCCCTGATGACTTAGTACACACATGTTGTAAATAATAGTGCTGTATACTCCAGTAGAGGTTTTTGACCAGCAACTGTTCCAGCCTCCACCGTCCCCTGCACACATCTTCTTATGGGCAACATGTGAATGGCATACTGTAGGCAGACGTGACCTTTTTCTCTGTCGTAAATAAGAGTATAGTGTGTAACGCCAGCTTGTAACAGAAGACCCACACTCTGCATGCATGTCGCTTAGCGGGTTAGCTTTCAAATCTTTGCATGTGTCCTGATTCCAGTCAGGAGCTGGTATGCTGCGAGAGAAGAGTCTGATCGACTTCGACagatgtcagagagagagagagagaaagagagaggggggggggttcccTTAATCCCAATCAGAGACTCAGTGCTTTAGATTTCTTATTTTAAAGTAGAACTGGTCTGTTGTGTTAATGTGGCTCAAACACaggaaaaacgtcaaaaaacaCATCATAAGTGGAGCAACATGTGTCAGGGAAACCCAGTCTGTGTCGAGGAAACCTTTTGTTATTGCTTTGATACTGTGATGTTGCAGCTGTATGATGCCATTGTATATTTCAGGTAATGCTGCCGACTTCCATTTATTGTGGATCCCTCCCTGCATTGCACCGACACCTTGTGAGTCTTCATATCGAGCCTTAACAAGAGCTGACTTCTCATGATCAAACTAACACGTGTGCATACATTTGTAATTACTACCTCTAGAGCTACTCATTATACGCTTATTACACTATACTAACATCATAAGAGTTGATCTTAAAGTTTCTAGAGAAAGATGCAACTTAAGTACATCAATAGCTGTAAGTAGATTTAAAAGCTCTTATCAGAGCAGTAGTCATAGTCTCCTGAAGTTCATTCATACACAGATTCCTCCTCCATCATAAAACAAAATCAGGGCTGGGCTGAAAACGTGCTTGCAAAAATGTTCTAGTGCAGGACCAGAAAGTTTGGGTTTACCACGTAAGGGCAGATCAAGGTATACTacattgattttcaaatattttcctAAACTTTCTGGTGCTTGATGCAAGGCTGAAATTATAATGCCTGCATCCTTTGTCTCCTAATGTAAAGTTAGACTATGTATTGTCtaaattttgattttaaaacagaagtgaagtaacatcttcaacattttttagacTATATGGATGTTCTTTTAGTGATTAAGTGCTTTTTAAACAGACCCATCAACAGTCCAATGATTAGGGAGTGTCTGCAAACGAGTCCCCAGCTGAGCAGCCACCAGTCTGGGATGGACCGACCGTATGACAGATGTTTGTTGTTTGTAGCTTGTTGTCAAGGCGTGCTGTTATTCTTCTGTCAGAAATCCTGACCAGCCAATCAGGATAGAAGAACGCAACATGTCTCTGGTGGGTGGCGAACATATGGATGTGTTTGGACTGAGCTGAGTCACTGAATTAAAGGACAGATTAGAACAGAAGTGTGTCGCTCTTAAAGGAAATGTGCTTTACGACCAAACAgcttttaaataacattttttactttgaaaaaaaattctctATTCTAAGTTCAGCGTATTACATGGCATGACTGGACTTCTATTTAACCCAAATAGGACCCGAGTATGTAAATTGTCTAATACCTAACAGCCTAATTAATGACAGCACCGCTCTGTCTCATGCTCTATGCTCATAAACAACATCTCAGGGCTTCACATTCACAATCACAGCCACCATGAGCCATCACCACTGTCTTCCTCATGTGAGTGCTGATGAAAAATCAGGTCGGTGAGTATTCTTCGAGGCTTAGCAGATAAATGGGATGATAAATTTACAGAAATAACATGTTATACATAGTGTCTCCATTCCAGCACATgacatccaaaatgaaaaaaatcccTCTGGTCAGACCCTACTGTATGTGTCCAAGCAAACCCTCTATTTGACATCATGTTTCAAGTATAATAAATGAATCCGAAGGAGGGGGGGGATGTGTACTATATTGCCACCTGCTGTCCAACTGTCTTATTTCAACATATCTAAATTACATGTGCTATATATTGTTAATCTTGTAAGTAAAATAGCGTGCCATGACATAGTAAAATGCAAAAGAAATGCACACGCTAATTTCGTTCaaagaaatgtttgttttatttctgtatgcCTATACTGTAGCGTCAACATGATTATGTGAAGAATCACAGTTCTGTATATATAGACTCATCACTATGCTGTATTGTATGTGAATCATTGTGTTGTAGTAAAAAGTTCAATAAACTTGTAGAAAGGAA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0007018 microtubule-based movement biological_process
GO:0005871 kinesin complex cellular_component
GO:0005874 microtubule cellular_component
GO:0005524 ATP binding molecular_function
GO:0003777 microtubule motor activity molecular_function
GO:0008017 microtubule binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU71061 lncRNA downstream 113749 26185427 ~ 26212141 (-) True G53162
TU71095 lncRNA downstream 117750 26207689 ~ 26208140 (-) True G53194
TU71086 lncRNA downstream 130719 26194498 ~ 26195171 (-) True G53185
TU71080 lncRNA downstream 136176 26185856 ~ 26189714 (-) False G53179
TU71079 lncRNA downstream 136176 26188337 ~ 26189714 (-) True G53179
TU71167 lncRNA upstream 16041 26364320 ~ 26364799 (-) True G53240
TU71286 lncRNA upstream 43733 26392012 ~ 26402301 (-) True LOC120559114
TU71289 lncRNA upstream 52724 26401003 ~ 26523921 (-) False G53324
TU71307 lncRNA upstream 94803 26443082 ~ 26444898 (-) True G53335
TU71290 lncRNA upstream 99194 26447473 ~ 26580105 (-) True G53324
XM_039800444.1 mRNA downstream 10010 26286548 ~ 26315880 (-) True LOC120559019
XM_039799223.1 mRNA downstream 39601 26276415 ~ 26286289 (-) True LOC120558305
XM_039799224.1 mRNA downstream 39735 26276415 ~ 26286155 (-) False LOC120558305
XM_039800441.1 mRNA downstream 93476 26228890 ~ 26232414 (-) True LOC120559017
XM_039799534.1 mRNA downstream 99443 26225129 ~ 26226447 (-) True LOC120558512
XM_039799703.1 mRNA upstream 2509 26350788 ~ 26360818 (-) True mbd6
XM_039800570.1 mRNA upstream 48497 26396776 ~ 26402310 (-) False LOC120559114
XM_039801863.1 mRNA upstream 59915 26408194 ~ 26414981 (-) True actr5
XM_039801746.1 mRNA upstream 87404 26435683 ~ 26442645 (-) True LOC120559754
XM_039801742.1 mRNA upstream 96672 26444951 ~ 26476075 (-) True si:dkey-11f4.7
TU71098 other downstream 111008 26212993 ~ 26214882 (-) True G53196
TU70950 other downstream 353718 25947381 ~ 25972172 (-) False acot7
TU70611 other downstream 1572803 24750440 ~ 24753087 (-) False phactr3a
TU70430 other downstream 1986434 24335149 ~ 24339456 (-) False masp2
TU70089 other downstream 3006206 23308500 ~ 23319684 (-) True G52501
XR_005639354.1 other upstream 298535 26646814 ~ 26658321 (-) False dcp1a
XR_005639355.1 other upstream 298535 26646814 ~ 26658321 (-) False dcp1a
XR_005639353.1 other upstream 298535 26646814 ~ 26658321 (-) False dcp1a
XR_005639352.1 other upstream 298535 26646814 ~ 26658321 (-) False dcp1a
TU71391 other upstream 444173 26792452 ~ 26795028 (-) True selenok

Expression Profile