RNA id: TU91331


Basic Information

Item Value
RNA id TU91331
length 560
lncRNA type inter_gene
GC content 0.33
exon number 3
gene id G68358
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 41432386 ~ 41549693 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctttctaaaatgttttaatactttaactacattttcctgattatacttacatacttttactgaagtaacattttcactgcaggactttgacttgtaacagagtattattacagtgtggtattagtacttttactgcagtaatacttcttccacttccTGCCTGTGAGgatataaacaaatacacaatGCCCCCCTCTGGTGGTAGGTGTTCTGCATGATGATGATTTTATTTCCATGAACAAAGCATAAACAATCCATgtgattataaaaacatttgagtacagttacagtttttgtttgGCTACATTACAATCACAACACGATATGTAGTTTATAATaagattgttttcattttatatattttcctCAACATAATAGATTACTAAATAATCCAAATCAGACACTGTGCCCTTAAAGTAGAAGAGGTTTGTCATTCACTAAATGTTTTACATAAACAACACATGATAAATCTAACTAtaaagcttgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctgtgtctgtgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91312 lncRNA upstream 27572 41366584 ~ 41404814 (+) False G68349
TU91322 lncRNA upstream 31813 41366584 ~ 41400573 (+) False G68349
TU91317 lncRNA upstream 31813 41379441 ~ 41400573 (+) True G68349
TU91306 lncRNA upstream 31813 41380768 ~ 41400573 (+) False G68349
TU91285 lncRNA upstream 161537 41135777 ~ 41270849 (+) False anxa1a
TU91381 lncRNA downstream 1219 41481243 ~ 41552744 (+) False G68374
TU91366 lncRNA downstream 4035 41484059 ~ 41552744 (+) False G68374
TU91368 lncRNA downstream 4035 41484059 ~ 41552744 (+) False G68374
TU91376 lncRNA downstream 4035 41484059 ~ 41552744 (+) False G68374
TU91377 lncRNA downstream 4035 41484059 ~ 41552744 (+) False G68374
XM_039804053.1 mRNA upstream 164867 41266647 ~ 41267519 (+) True LOC120561097
XM_039802432.1 mRNA upstream 177764 41222702 ~ 41254622 (+) True LOC120560189
XM_039802431.1 mRNA upstream 217516 41193223 ~ 41214870 (+) False anxa1a
XM_039804052.1 mRNA upstream 334590 41081607 ~ 41097796 (+) True LOC120561096
XM_039802429.1 mRNA upstream 361480 41054751 ~ 41070906 (+) True rorb
XM_039802520.1 mRNA downstream 118203 41598227 ~ 41605767 (+) True lsm1
XM_039802490.1 mRNA downstream 129908 41609932 ~ 41619652 (+) True LOC120560217
XM_039802486.1 mRNA downstream 150712 41630736 ~ 41635889 (+) True LOC120560213
XM_039802487.1 mRNA downstream 161306 41641330 ~ 41654650 (+) True LOC120560214
XM_039802489.1 mRNA downstream 219338 41699362 ~ 41702500 (+) True LOC120560215
TU91319 other upstream 31813 41366584 ~ 41400573 (+) False G68349
TU91301 other upstream 164912 41266726 ~ 41267474 (+) False LOC120561097
TU91279 other upstream 170036 41207784 ~ 41262350 (+) False anxa1a
TU91431 other downstream 240989 41721013 ~ 41756128 (+) False aebp1b
TU91472 other downstream 429800 41909824 ~ 42005961 (+) True G68429
TU91474 other downstream 452539 41932563 ~ 41934316 (+) False LOC120561105
TU91478 other downstream 452539 41932563 ~ 41934316 (+) False LOC120561105
TU91611 other downstream 842449 42322473 ~ 42396643 (+) True G68504

Expression Profile