Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579758.1 |
| length | 203 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 3 |
| gene id | LOC117599299 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 1644042 ~ 1645433 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1280 | lncRNA | downstream | 9193 | 1634613 ~ 1634849 (-) | True | G1024 |
| TU1190 | lncRNA | downstream | 49968 | 1582333 ~ 1594074 (-) | False | G951 |
| TU1189 | lncRNA | downstream | 49968 | 1582960 ~ 1594074 (-) | True | G951 |
| TU1180 | lncRNA | downstream | 64076 | 1579758 ~ 1579966 (-) | True | G943 |
| TU1086 | lncRNA | downstream | 196588 | 1438630 ~ 1447454 (-) | True | G857 |
| TU1285 | lncRNA | upstream | 4088 | 1649521 ~ 1650488 (-) | True | G1029 |
| TU1357 | lncRNA | upstream | 204093 | 1849526 ~ 1849727 (-) | True | G1089 |
| TU1368 | lncRNA | upstream | 224213 | 1869646 ~ 1872700 (-) | True | G1100 |
| XR_003402788.2 | lncRNA | upstream | 466923 | 2112356 ~ 2129427 (-) | True | LOC113526561 |
| TU1506 | lncRNA | upstream | 517891 | 2163324 ~ 2165381 (-) | True | G1216 |
| XM_026913939.2 | mRNA | downstream | 11788 | 1620046 ~ 1632254 (-) | False | tcea3 |
| XM_026913272.2 | mRNA | upstream | 8012 | 1653445 ~ 1659672 (-) | True | tent5ba |
| XM_034304501.1 | mRNA | upstream | 28329 | 1673762 ~ 1683841 (-) | True | zdhhc18a |
| XM_034304506.1 | mRNA | upstream | 28329 | 1673762 ~ 1683841 (-) | False | zdhhc18a |
| XM_034304508.1 | mRNA | upstream | 28329 | 1673762 ~ 1683841 (-) | False | zdhhc18a |
| XM_034304510.1 | mRNA | upstream | 28329 | 1673762 ~ 1683157 (-) | False | zdhhc18a |
| XR_004578099.1 | other | downstream | 966242 | 677401 ~ 677800 (-) | True | LOC117597201 |
| TU694 | other | downstream | 1044876 | 598781 ~ 599166 (-) | True | G502 |
| TU238 | other | downstream | 1477973 | 158802 ~ 166069 (-) | True | ptpn6 |
| TU237 | other | downstream | 1481976 | 158802 ~ 162066 (-) | False | ptpn6 |
| TU214 | other | downstream | 1505198 | 137374 ~ 138844 (-) | False | spag1b |
| XR_004578455.1 | other | upstream | 795413 | 2440846 ~ 2451520 (-) | False | hint3 |
| TU1883 | other | upstream | 1272895 | 2918328 ~ 2919811 (-) | False | eny2 |
| TU2085 | other | upstream | 1598402 | 3243835 ~ 3281162 (-) | True | G1718 |
| TU2447 | other | upstream | 2012747 | 3658180 ~ 3659319 (-) | True | G2011 |
| TU2456 | other | upstream | 2028813 | 3674246 ~ 3675836 (-) | True | G2020 |
