Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU460953 |
| length | 616 |
| RNA type | TUCP |
| GC content | 0.49 |
| exon number | 7 |
| gene id | LOC117596207 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 17668368 ~ 17727825 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU460929 | lncRNA | downstream | 27199 | 17620936 ~ 17641169 (-) | True | G388824 |
| TU460919 | lncRNA | downstream | 47575 | 17601942 ~ 17620793 (-) | True | G388814 |
| TU460858 | lncRNA | downstream | 58934 | 17604526 ~ 17609434 (-) | True | G388757 |
| TU460885 | lncRNA | downstream | 78161 | 17569615 ~ 17590207 (-) | True | G388781 |
| TU460889 | lncRNA | downstream | 115690 | 17552195 ~ 17552678 (-) | True | G388785 |
| TU460989 | lncRNA | upstream | 27768 | 17755586 ~ 17757330 (-) | True | G388874 |
| TU460991 | lncRNA | upstream | 31342 | 17759160 ~ 17759585 (-) | True | G388875 |
| TU461219 | lncRNA | upstream | 62209 | 17790027 ~ 17790306 (-) | True | G389062 |
| TU461221 | lncRNA | upstream | 69579 | 17797397 ~ 17797821 (-) | True | G389064 |
| TU461222 | lncRNA | upstream | 71064 | 17798882 ~ 17801153 (-) | True | G389065 |
| XM_034300867.1 | mRNA | downstream | 34307 | 17627530 ~ 17634061 (-) | True | uprt |
| XM_034300507.1 | mRNA | downstream | 123785 | 17535427 ~ 17544583 (-) | False | LOC113524239 |
| XM_034300508.1 | mRNA | downstream | 123785 | 17535427 ~ 17544583 (-) | True | LOC113524239 |
| XM_034300517.1 | mRNA | downstream | 142032 | 17520856 ~ 17526336 (-) | False | LOC117595671 |
| XM_034300516.1 | mRNA | downstream | 142316 | 17520856 ~ 17526052 (-) | True | LOC117595671 |
| XM_034300484.1 | mRNA | upstream | 16349 | 17744167 ~ 17749190 (-) | True | LOC117596209 |
| XM_034300815.1 | mRNA | upstream | 50643 | 17778461 ~ 17782652 (-) | False | iqcd |
| XM_034300814.1 | mRNA | upstream | 50643 | 17778461 ~ 17782652 (-) | True | iqcd |
| XM_034300747.1 | mRNA | upstream | 121529 | 17849347 ~ 17993048 (-) | False | tenm1 |
| XM_034300746.1 | mRNA | upstream | 121529 | 17849347 ~ 17993048 (-) | True | tenm1 |
| XR_004577381.1 | other | downstream | 123785 | 17537435 ~ 17544583 (-) | False | LOC113524239 |
| TU460777 | other | downstream | 340348 | 17290344 ~ 17328020 (-) | True | G388705 |
| LOC117596251 | other | downstream | 610486 | 17055583 ~ 17057882 (-) | True | LOC117596251 |
| TU460427 | other | downstream | 698342 | 16966288 ~ 16970026 (-) | False | crx |
| trnam-cau_51 | other | downstream | 1233098 | 16435198 ~ 16435270 (-) | True | trnam-cau_51 |
| TU461266 | other | upstream | 535662 | 18263480 ~ 18277958 (-) | True | G389092 |
| TU461629 | other | upstream | 812512 | 18540330 ~ 18630565 (-) | False | fdx1b |
| trnap-agg_16 | other | upstream | 1157064 | 18884882 ~ 18884953 (-) | True | trnap-agg_16 |
