Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU460889 |
| length | 258 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G388785 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 17552195 ~ 17552678 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU460855 | lncRNA | downstream | 140287 | 17410003 ~ 17411908 (-) | True | G388754 |
| TU460790 | lncRNA | downstream | 196836 | 17343079 ~ 17355359 (-) | True | G388709 |
| TU460769 | lncRNA | downstream | 267594 | 17282100 ~ 17284601 (-) | True | G388698 |
| TU460762 | lncRNA | downstream | 349203 | 17202786 ~ 17202992 (-) | True | G388692 |
| TU460437 | lncRNA | downstream | 563180 | 16978449 ~ 16989015 (-) | False | G388440 |
| TU460885 | lncRNA | upstream | 16937 | 17569615 ~ 17590207 (-) | True | G388781 |
| TU460919 | lncRNA | upstream | 49264 | 17601942 ~ 17620793 (-) | True | G388814 |
| TU460858 | lncRNA | upstream | 51848 | 17604526 ~ 17609434 (-) | True | G388757 |
| TU460929 | lncRNA | upstream | 68258 | 17620936 ~ 17641169 (-) | True | G388824 |
| TU460980 | lncRNA | upstream | 154163 | 17706841 ~ 17726439 (-) | True | G388865 |
| XM_034300507.1 | mRNA | downstream | 7612 | 17535427 ~ 17544583 (-) | False | LOC113524239 |
| XM_034300508.1 | mRNA | downstream | 7612 | 17535427 ~ 17544583 (-) | True | LOC113524239 |
| XM_034300517.1 | mRNA | downstream | 25859 | 17520856 ~ 17526336 (-) | False | LOC117595671 |
| XM_034300516.1 | mRNA | downstream | 26143 | 17520856 ~ 17526052 (-) | True | LOC117595671 |
| XM_034300519.1 | mRNA | downstream | 37077 | 17506787 ~ 17515118 (-) | False | LOC113531111 |
| XM_034300867.1 | mRNA | upstream | 74852 | 17627530 ~ 17634061 (-) | True | uprt |
| XM_034300482.1 | mRNA | upstream | 138585 | 17691263 ~ 17694474 (-) | True | LOC113544925 |
| XM_034300481.1 | mRNA | upstream | 145537 | 17698215 ~ 17727812 (-) | False | LOC117596207 |
| XM_034300478.1 | mRNA | upstream | 145537 | 17698215 ~ 17718018 (-) | True | LOC117596207 |
| XM_034300480.1 | mRNA | upstream | 162073 | 17714751 ~ 17727825 (-) | False | LOC117596207 |
| XR_004577381.1 | other | downstream | 7612 | 17537435 ~ 17544583 (-) | False | LOC113524239 |
| TU460777 | other | downstream | 224175 | 17290344 ~ 17328020 (-) | True | G388705 |
| LOC117596251 | other | downstream | 494313 | 17055583 ~ 17057882 (-) | True | LOC117596251 |
| TU460427 | other | downstream | 582169 | 16966288 ~ 16970026 (-) | False | crx |
| trnam-cau_51 | other | downstream | 1116925 | 16435198 ~ 16435270 (-) | True | trnam-cau_51 |
| TU460953 | other | upstream | 115690 | 17668368 ~ 17727818 (-) | False | LOC117596207 |
| TU461266 | other | upstream | 710802 | 18263480 ~ 18277958 (-) | True | G389092 |
| TU461629 | other | upstream | 987652 | 18540330 ~ 18630565 (-) | False | fdx1b |
| trnap-agg_16 | other | upstream | 1332204 | 18884882 ~ 18884953 (-) | True | trnap-agg_16 |
