Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU460790 |
| length | 246 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G388709 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 17343079 ~ 17355359 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU460769 | lncRNA | downstream | 58478 | 17282100 ~ 17284601 (-) | True | G388698 |
| TU460762 | lncRNA | downstream | 140087 | 17202786 ~ 17202992 (-) | True | G388692 |
| TU460436 | lncRNA | downstream | 354064 | 16978449 ~ 16989015 (-) | False | G388440 |
| TU460437 | lncRNA | downstream | 354064 | 16978449 ~ 16989015 (-) | False | G388440 |
| TU460438 | lncRNA | downstream | 354064 | 16978449 ~ 16989015 (-) | True | G388440 |
| TU460855 | lncRNA | upstream | 54644 | 17410003 ~ 17411908 (-) | True | G388754 |
| TU460889 | lncRNA | upstream | 196836 | 17552195 ~ 17552678 (-) | True | G388785 |
| TU460885 | lncRNA | upstream | 214256 | 17569615 ~ 17590207 (-) | True | G388781 |
| TU460919 | lncRNA | upstream | 246583 | 17601942 ~ 17620793 (-) | True | G388814 |
| TU460858 | lncRNA | upstream | 249167 | 17604526 ~ 17609434 (-) | True | G388757 |
| XM_034300935.1 | mRNA | downstream | 15024 | 17323062 ~ 17328055 (-) | True | nono |
| XM_034300930.1 | mRNA | downstream | 26837 | 17300524 ~ 17316242 (-) | False | aifm1 |
| XM_034300929.1 | mRNA | downstream | 26837 | 17300524 ~ 17316242 (-) | True | aifm1 |
| XM_034300932.1 | mRNA | downstream | 26839 | 17300524 ~ 17316240 (-) | False | aifm1 |
| XM_034300931.1 | mRNA | downstream | 26840 | 17301243 ~ 17316239 (-) | False | aifm1 |
| XM_026922201.2 | mRNA | upstream | 47425 | 17402784 ~ 17408212 (-) | True | apool |
| XM_034300803.1 | mRNA | upstream | 57576 | 17412935 ~ 17446306 (-) | True | si:ch211-26b3.4 |
| XM_026921905.2 | mRNA | upstream | 94394 | 17449753 ~ 17453410 (-) | True | si:dkey-237j10.2 |
| XM_026921904.2 | mRNA | upstream | 112384 | 17467743 ~ 17482963 (-) | False | LOC113531290 |
| XM_026921903.2 | mRNA | upstream | 112384 | 17467743 ~ 17482963 (-) | True | LOC113531290 |
| TU460777 | other | downstream | 15059 | 17290344 ~ 17328020 (-) | True | G388705 |
| LOC117596251 | other | downstream | 285197 | 17055583 ~ 17057882 (-) | True | LOC117596251 |
| TU460427 | other | downstream | 373053 | 16966288 ~ 16970026 (-) | False | crx |
| trnam-cau_51 | other | downstream | 907809 | 16435198 ~ 16435270 (-) | True | trnam-cau_51 |
| trnam-cau_50 | other | downstream | 911615 | 16431392 ~ 16431464 (-) | True | trnam-cau_50 |
| XR_004577381.1 | other | upstream | 182076 | 17537435 ~ 17544583 (-) | False | LOC113524239 |
| TU460953 | other | upstream | 313009 | 17668368 ~ 17727818 (-) | False | LOC117596207 |
| TU461266 | other | upstream | 908121 | 18263480 ~ 18277958 (-) | True | G389092 |
| TU461629 | other | upstream | 1184971 | 18540330 ~ 18630565 (-) | False | fdx1b |
| trnap-agg_16 | other | upstream | 1529523 | 18884882 ~ 18884953 (-) | True | trnap-agg_16 |
