Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU460436 |
| length | 388 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G388440 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 16978449 ~ 16989015 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU460396 | lncRNA | downstream | 27398 | 16945913 ~ 16951051 (-) | True | G388406 |
| TU460395 | lncRNA | downstream | 27913 | 16948975 ~ 16950536 (-) | True | G388405 |
| TU460385 | lncRNA | downstream | 128045 | 16843993 ~ 16850404 (-) | True | G388400 |
| TU460398 | lncRNA | downstream | 140401 | 16829748 ~ 16838048 (-) | True | G388408 |
| TU460375 | lncRNA | downstream | 214973 | 16758240 ~ 16763476 (-) | True | fxyd2 |
| TU460762 | lncRNA | upstream | 213771 | 17202786 ~ 17202992 (-) | True | G388692 |
| TU460769 | lncRNA | upstream | 293085 | 17282100 ~ 17284601 (-) | True | G388698 |
| TU460790 | lncRNA | upstream | 354064 | 17343079 ~ 17355359 (-) | True | G388709 |
| TU460855 | lncRNA | upstream | 420988 | 17410003 ~ 17411908 (-) | True | G388754 |
| TU460889 | lncRNA | upstream | 563180 | 17552195 ~ 17552678 (-) | True | G388785 |
| XM_034300808.1 | mRNA | downstream | 8435 | 16965966 ~ 16970014 (-) | True | crx |
| XM_026921817.2 | mRNA | downstream | 23276 | 16951381 ~ 16955173 (-) | True | LOC113531238 |
| XM_026921782.2 | mRNA | downstream | 51270 | 16908561 ~ 16927179 (-) | True | gjd1a |
| XM_034300657.1 | mRNA | downstream | 87936 | 16883148 ~ 16890513 (-) | True | nfkbib |
| XM_026921809.2 | mRNA | downstream | 106435 | 16867453 ~ 16872014 (-) | True | tppp2 |
| XM_026921786.2 | mRNA | upstream | 10719 | 16999734 ~ 17007332 (-) | True | srsf7a |
| XM_034300430.1 | mRNA | upstream | 19509 | 17008524 ~ 17033818 (-) | True | slc8a2a |
| XM_026921792.2 | mRNA | upstream | 46443 | 17035458 ~ 17039552 (-) | True | nccrp1 |
| XM_034300755.1 | mRNA | upstream | 57575 | 17046590 ~ 17052637 (-) | True | LOC117596250 |
| XM_034300757.1 | mRNA | upstream | 57575 | 17046590 ~ 17052617 (-) | False | LOC117596250 |
| TU460427 | other | downstream | 8423 | 16966288 ~ 16970026 (-) | False | crx |
| trnam-cau_51 | other | downstream | 543179 | 16435198 ~ 16435270 (-) | True | trnam-cau_51 |
| trnam-cau_50 | other | downstream | 546985 | 16431392 ~ 16431464 (-) | True | trnam-cau_50 |
| XR_003403223.2 | other | downstream | 597662 | 16377585 ~ 16380787 (-) | False | LOC113531235 |
| TU459046 | other | downstream | 2055065 | 14916662 ~ 14923384 (-) | True | ccdc84 |
| LOC117596251 | other | upstream | 66568 | 17055583 ~ 17057882 (-) | True | LOC117596251 |
| TU460777 | other | upstream | 301329 | 17290344 ~ 17328020 (-) | True | G388705 |
| XR_004577381.1 | other | upstream | 548420 | 17537435 ~ 17544583 (-) | False | LOC113524239 |
| TU460953 | other | upstream | 679353 | 17668368 ~ 17727818 (-) | False | LOC117596207 |
| TU461266 | other | upstream | 1274465 | 18263480 ~ 18277958 (-) | True | G389092 |
