Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU460375 |
| length | 525 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 6 |
| gene id | fxyd2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 16758240 ~ 16763476 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0005215 | transporter activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU460340 | lncRNA | downstream | 59461 | 16646975 ~ 16698779 (-) | True | G388359 |
| XR_004577437.1 | lncRNA | downstream | 69195 | 16687035 ~ 16689045 (-) | True | LOC117596255 |
| TU460049 | lncRNA | downstream | 322861 | 16429227 ~ 16435379 (-) | True | G388134 |
| TU459998 | lncRNA | downstream | 421116 | 16334604 ~ 16337124 (-) | True | G388091 |
| TU459986 | lncRNA | downstream | 451114 | 16306509 ~ 16307126 (-) | True | G388082 |
| TU460398 | lncRNA | upstream | 66272 | 16829748 ~ 16838048 (-) | True | G388408 |
| TU460385 | lncRNA | upstream | 80517 | 16843993 ~ 16850404 (-) | True | G388400 |
| TU460396 | lncRNA | upstream | 182437 | 16945913 ~ 16951051 (-) | True | G388406 |
| TU460395 | lncRNA | upstream | 185499 | 16948975 ~ 16950536 (-) | True | G388405 |
| TU460436 | lncRNA | upstream | 214973 | 16978449 ~ 16989015 (-) | False | G388440 |
| XM_026921699.2 | mRNA | downstream | 2104 | 16744036 ~ 16756136 (-) | True | arhgap35b |
| XM_034300959.1 | mRNA | downstream | 17148 | 16712149 ~ 16741092 (-) | True | LOC113531483 |
| XM_034300825.1 | mRNA | downstream | 54972 | 16694308 ~ 16703268 (-) | True | LOC113531479 |
| XM_026921725.2 | mRNA | downstream | 89992 | 16658651 ~ 16668248 (-) | True | LOC113531175 |
| XM_026921724.2 | mRNA | downstream | 90028 | 16658651 ~ 16668212 (-) | False | LOC113531175 |
| XM_026921752.2 | mRNA | upstream | 6290 | 16769766 ~ 16780055 (-) | True | tmprss13b |
| XM_026921797.2 | mRNA | upstream | 25678 | 16789154 ~ 16803393 (-) | True | scn4bb |
| XM_026921787.2 | mRNA | upstream | 45016 | 16808492 ~ 16818245 (-) | True | mpzl2b |
| XM_034300751.1 | mRNA | upstream | 69406 | 16832882 ~ 16839380 (-) | False | rnf214 |
| XM_034300750.1 | mRNA | upstream | 69406 | 16832882 ~ 16839376 (-) | True | rnf214 |
| trnam-cau_51 | other | downstream | 322970 | 16435198 ~ 16435270 (-) | True | trnam-cau_51 |
| trnam-cau_50 | other | downstream | 326776 | 16431392 ~ 16431464 (-) | True | trnam-cau_50 |
| XR_003403223.2 | other | downstream | 377453 | 16377585 ~ 16380787 (-) | False | LOC113531235 |
| TU459046 | other | downstream | 1834856 | 14916662 ~ 14923384 (-) | True | ccdc84 |
| XR_003403286.1 | other | downstream | 2842743 | 13915364 ~ 13915497 (-) | True | LOC113531684 |
| TU460427 | other | upstream | 202812 | 16966288 ~ 16970026 (-) | False | crx |
| LOC117596251 | other | upstream | 292107 | 17055583 ~ 17057882 (-) | True | LOC117596251 |
| TU460777 | other | upstream | 526868 | 17290344 ~ 17328020 (-) | True | G388705 |
| XR_004577381.1 | other | upstream | 773959 | 17537435 ~ 17544583 (-) | False | LOC113524239 |
| TU460953 | other | upstream | 904892 | 17668368 ~ 17727818 (-) | False | LOC117596207 |
