mpzl2b (LOC108259864)


Basic Information

Item Value
gene id mpzl2b
gene name LOC108259864
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047621.1
NCBI id CM018567.1
chromosome length 18889892
location 16808492 ~ 16818245 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026921787.2
CTGACTCCGCCTCTTCGACTGCACCTCGCGACGACTCTTCCGCTCGTGAGCACGGCAGGTTTATCACGTCAGGAGTTTAGGAAGTGAGTTTGAACAAGCGAGGACTGAAATCACGGCTTTattgcctacacacacacacacacacacacacacacacactacacacttctccCGGGGTTTGCTCTGCTGTCTCTCATGTTGCGGATATGGATACAGTTTCTGGTCAGTGTTGTAGGTGTGCTGCTCACGCCAGgtgtgTATCGCACATTGGCGATCGAGGTGTCCACGCCCAAAGAGCTGACAGCGGCTAACGGGACAGATGTGCGGCTCAAGTGCACCTTCAAATCCAGCCAGCCGGTGTCGGAGAAATCAGTGTCCGTCTCCTGGAGCTTCAAACCACTTGGCTCGAGCTCGGAGGAAAAGTTCTTCTACTATCAAGAGGTACCCTTCCCACCTGATCGAGGTCAATTTAAAGGTCATGCAGTGTGGTCGGGGAACGTGCTGAAGAACGACGGCTCCATCACGCTGACCAGCGTGCAGTTCAGCTTTAATGGCACCTACACCTGCCAGGTGCTCAATCCACCCGACGTGCACGGCTTCACCAGCGAGATCCGCCTCGAGGTCGTTCAGTCAGTGAAGCTCTCTGAGATCGGAATTCTGGCTGCGGCGGTGGGCGGAGCCATCTTGctcatcctcttcatcctctccaTTGTTTTTACCGTGCGCTATTTCCGAGGTCGCCGTGGAGACGCAGCCATAGAGCTGCAAGACTCAAAGCGGGCGAGCGTATGcaggacTCATGAGGAGTTTATGCCAATAAACGGACCAGAGAAAGAGCTAGAAAAGGACAAACTCCGAGACGATCTAGAAAAGAGCAAACTTCATGAAGAGGAGCCAGATGCTAAGAGCGAGGTTAAAGAATCTCATGCTAACTTAAAACCCAGCGATGATGACTAAGCAAACGTGATATCTCCGGTCCATAATGGACATATCTTCTAGATTCTGCGTAACCAGATGCAGATGCAACTACTACTTCTACgtatcatttttaatcattgttttatagtttttatgGTTAGCATACATTTTTAGTGTTTCATACTAACGATGCTGACTATGAAATGATCAAACTGAAATGAGCAGTGAGTAAACTTTTGCATAGATGCTAGCCCTGAAATGAATTGAAAGAAGTGATAAAGCCTAGCCTCTCGTGACCACACGCCTTTTCAGATTAAACGCTAGCTTAAAGGAACAGCCTGCAACATGTTAGCAAAGATGCTAATAACATAACAAAACTTGAATGGTTGTGCTAGCCATGACAGAACACAATTGGAACAACTTAGCAACTGTAAAAGACAAGAGTGGGGGGAAGAAAAAAGTCTCTCACGTCACGACCTCGATCAACCTGGGTGTTgggtaactataaaaggataaaatcgGAAGACGCTAGCAAAGGTGCTAACACTGATATGACTAAAAAgggaaaatgtttgtaaaaatggTGACCTTAGCGGTGAAACTTGGAGTAAAAGAACCAAAACATTGTGTTTTAAAGACTGAATATATAGCATGACCTCACTtgcaaatttacaaaaatatgaaatgttatAAATGGTTAAATTTACAGTAAGAGAAGATGAACGTTGCTTTTATTGTGATCTTTATTGCAAAGATGAAAAGTTACTTACAAGCAGACTGTATGTGGCGATTTTGAGCACGAGGTCGACTGTATCAAAAATAAATCGCTAAAAAAGCCAAACGATCAGAGCTTTcaactttttaataaaaaaaaaaatcacctcaaaatgatataaataatgataaacgtgcttagaaataataaattatgaatgAGGTTCATGTTTTATACAAACTGCACTGTATCTTTtgattttcatacattttttaatctcgATTTTTACCAgtttgtcatctttttttttctttatcccTAAAATAAAACTACTTTAATACTAAGAAAGTCTAAGAAAGAATTGCTGTGTATTTGCTGACTGTGGTATTATTGTTAGTGTTATTTGTATAGGACTAACCtgcctacattttttttttttttatggagaattttaatattatttgcattatataatgtatgttgAGAAGAGGGCACCTTAGTCTGGTATGCGATGTTACTCTATAGGTTGTAATTTTTATATACtgtgtttcagtatttttttaaaagatggtTTACAGTTTCTAGAAagttttaagatgaataaatatttgtg

Function

NR:

description
PREDICTED: myelin protein zero-like protein 2 isoform X1

GO:

id name namespace
GO:0042802 identical protein binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026921787.2 True 2246 mRNA 0.41 5 16808492 16818245

Neighbor

gene id symbol gene type direction distance location
scn4bb LOC108259866,LOC108437026 coding downstream 5099 16789154 ~ 16803393 (-)
tmprss13b LOC108259860 coding downstream 28437 16769766 ~ 16780055 (-)
arhgap35b arhgap35,LOC108260288,LOC108437035,LOC107596120,LOC107734134,LOC107663410 coding downstream 52356 16744036 ~ 16756136 (-)
LOC113531483 NA coding downstream 67400 16712149 ~ 16741092 (-)
LOC113531479 NA coding downstream 105224 16694308 ~ 16703268 (-)
rnf214 rnf214 coding upstream 14637 16832882 ~ 16839380 (-)
tagln2 tagln,tagl,LOC107700246,LOC107548469,LOC107746372,LOC107710578,LOC107596134 coding upstream 35219 16853464 ~ 16861200 (-)
tppp2 LOC108259867,LOC108437044,LOC107548470,LOC107700244,LOC107746373,LOC107693436 coding upstream 49208 16867453 ~ 16872014 (-)
nfkbib nfkbib coding upstream 64903 16883148 ~ 16890513 (-)
gjd1a gjd1a,LOC108259863,LOC103027887,LOC107700241,LOC107548473,LOC108437049,LOC107746368,LOC107596136 coding upstream 90316 16908561 ~ 16927179 (-)
G388359 NA non-coding downstream 109713 16646975 ~ 16698779 (-)
LOC117596255 NA non-coding downstream 119447 16687035 ~ 16689045 (-)
G388134 NA non-coding downstream 373113 16429227 ~ 16435379 (-)
G388091 NA non-coding downstream 471368 16334604 ~ 16337124 (-)
G388082 NA non-coding downstream 501366 16306509 ~ 16307126 (-)
G388408 apoa4 non-coding upstream 11503 16829748 ~ 16838048 (-)
G388400 NA non-coding upstream 25748 16843993 ~ 16850404 (-)
G388406 NA non-coding upstream 127668 16945913 ~ 16951051 (-)
G388405 NA non-coding upstream 130730 16948975 ~ 16950536 (-)
G388440 NA non-coding upstream 160204 16978449 ~ 16989015 (-)
fxyd2 NA other downstream 45016 16758240 ~ 16763476 (-)
LOC113531235 NA other downstream 427705 16363494 ~ 16380787 (-)
gltpd2 LOC108260402 other downstream 920433 15882338 ~ 15888059 (-)
nrgna NA other downstream 1781623 15018893 ~ 15026869 (-)
ccdc84 ccdc84 other downstream 1885102 14916662 ~ 14923390 (-)
crx crx other upstream 147721 16965966 ~ 16970026 (-)
G388705 nono,LOC103047741,LOC107672625,LOC107741185,LOC107756548 other upstream 472099 17290344 ~ 17328020 (-)
LOC113524239 NA other upstream 717182 17535427 ~ 17544583 (-)
LOC117596207 LOC108262004,LOC108262359,LOC108260034,LOC108260038 other upstream 850123 17668368 ~ 17727825 (-)
G389092 NA other upstream 1056670 17874915 ~ 18277958 (-)

Expression


Co-expression Network