RNA id: TCONS_00007805


Basic Information

Item Value
RNA id TCONS_00007805
length 3202
RNA type mRNA
GC content 0.43
exon number 17
gene id XLOC_004091
representative False

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 18784847 ~ 18819178 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCACCTGGCGGAAACATACTGAACTTACCGGTGGAACCTGGAAGATACGGAGTAAAACACGGACCTCTTGAGGTGTGCCTGTCTTTGCAGCActaagagtgagtgagtgattaggTCTGTCAGATACAGATTCAGTATGTCTGCATGGCTGCAGCAGGAGGAGGCTGGTCCAACCAGTTCTGCTGAAGCCAAGAAATCAGAGCCTAGAGGCCAAGAGAAGAAATGCTCATGGGCTTCTTACATGACAAACTCCCCTACTGTGATCGTCATGATCGGCCTCCCTGCCAGAGGCAAGACGTACATGTCGAAAAAACTCACTCGCTACCTTAACTGGATAGGAGTTCCAACAAAGGTGTTCAATCTGGGTGTGTACCGGAGGGAAGCAGTTAAAGCGTACAAGTCATATGACTTCTTTAGACATGACAATGAGGAGGCCATGAAAATACGGAAACAGTGTGCATTGGTGGCTTTGCAAGATGTCAAGATCTACCTGAATGAGGAAGGTGGACAAATAGCTGTATTTGATGCCACAAACACAACTCGGGAGAGGAGGGATCTCATATTGGATTTTGCACAGGAGAATGCATACAAGGTGTTTTTTGTGGAGTCAGTATGTGATGATCCAGAGGTTATTGCTGCTAACATCCTGGAAGTTAAAGTTTCAAGTCCGGATTATCCAGAAGCACACAGAGAGAGAGTCATGGATGACTTCCTGAAACGTATTGAATGTTATAAGGTCACTTACCAGCCGCTAGATCCTGATGAATATGACAAAGACCTGTCCTTCATTAAGGTGATAAATGTGGGTCGTCGATTCCTGGTGAACCGTGTTCAGGACTACATCCAGAGCAAGATTGTCTACTACCTCATGAACATCCATGTACACTCGCACTCTATCTACCTGTGCAGGCATGGAGAGAGTGAACACAACATCCAAGGGCGTATTGGAGGAGACTCTGAACTCTCCTCACGAGGGAGACAGTTTGCGAGCGCCCTGCATGAGTTTGTTGAGGAGCATAAGCTATCTAACCTGAAGGTTTGGACAAGCCAGTTAAGGAGAACCATCCAGACGGCTGAGGAGCTGGGAGTTCCCTATGAACAGTGGAAAATCCTCAATGAGATAGACGCTGGTGTTTGTGAAGAGATGACCTATGAAATGATCCAGAACACATTCCCAGAGGAATTTGCTTTAAGAGATCAGGACAAGTACCATTACAGATATCCAGGAGGAGAGTCATATCAGGACCTGGTTCAGCGACTGGAGCCTGTAATTATGGAGCTTGAGAGACAAGGCAATGTACTAGTCATCTGCCATCAGGCGGTAATGCGGTGCCTACTAGCCTATTTCTTGGACAAGAGTGCAGATGATCTTGCCTATTTGCTATGTCCTCTTCATACTGTCATGAAGCTCACTCCTGTTGCCTACGGTTGCAAAGTTGAGATGTTTCATCTGAATGTGGAGGCAGTGAACACACATCGGGACAGACCGCTGCAGGGGAAAGTGAGACGAGACTGCGCTCCTCTGCTGTTAAGGCGGAATAGTTACACCCCTCTGTCCAGTCACGACCAGGTTAAGCGTCCCCGTCTCTACAGCGCTGGCAACCGGCCCTGGCTGCCCCTCACCCCTTCCCCCACCACCCTGCACTTCCCAAACACACCAGACGGGGCACTGCTGCTCCAGCAAAGCCAATCTCGTGTGGTTGGCAGCCATCTgaCTCCGTGTGTGAAGGAATCAACTTTGACTGCTCAGACGAAGTTAATGACTGTTTCCGCTTCTGAGTGAGACTGAGAAGAAATTTCTGAAATCCTGCATGAAAGTGAAACTTTGCTTCTAGATTTTCCCACTCCTCACTTTCTGCTTGCACTATCAGTGATGGGACTACATTTCCCATAAGCCCCAAATGGCAGATTGCCACTGCTATGGCACCAAACAATTCCGGCACTTAAACATTGTTGCTTATTTTAAGTGATGATGCCTTATTGAAGCTAAAGGAGGCGGTCTCCGTGAACTGAATGTGTTTGCACTTGAATTTGTTGGGTTGTGCAAATGAAAATAACCTTCACACAAAGTTTATGTTGCAACACGGTGGGGTTTGCAATAATGCATTTTCTCAATCATAAATATTGCGACATCCTCATACATACCACGGTCAGACATGAGCAAGAACAAAAATTCAGGAAATCAGATATTTGATGGAGACAGAGCGAGTTTGTACATTCTAAGTACGTTTGTGTCTTTAAGAGAATGCACTACATGAGACTTTAAAACTcttatcaaatattattttcttaatgTGTTGTGTAAAGTGCAAGTTAATTATGTCATATTTTTCTAGAAACCCATTgattgttttgcatttgtgacaACATAAAGAGGATTTATAGAATAAGGCATTTACTGGAAGTGAAGTATATTTTATAGGTCTGGTTTCTGCTAATGATGCaagttatttagttattataatatacagttgTTTAAATGAAGTTTTTTGAAGGGATTGAATGTAGTCTGTGCATTGTAAGCAAGCAATGTTTGTCTGGTTGTTAAATCTTAAATGACTAGCATAACCAGACTGTTTATATTTCTGGTTGAGGAGCTACACACTTCAATCATCAGACTATCATCATTGCAATAATACAGCAAAAAATATACACAACATGCCATCGTTTGAATGTTTAAGCAGAAAATGTCTGAAGTACAGTACATGATCAGTACTTTACTTTGATCATAGGACATATCGATGCATAATTTGAAATGCTGTGGCAAATATCTGACAAAAATAATCTCTGAGTTAAACGTCTCAATGCTGCATGCATGTCaacaatgcattaataaatgctgcataaCTTATGCTATTCAAAATACTTTTAGATGGACCACAGCATGTCCCTCCACATAGCTTTCAGTTTCATGTCAGTGACCCATATTCCTCACCTGAATCATCCGGACATCATCATCAGATGTGCAtggtgctgtgtaaaacatgcaaaACTGCAGTTAAGATATCCAAGCATGCATTTCAATTCCCCTTGTATTGACTGGATAGACAGCTCAGAACACGTTgcacaaaatgtcactttaaatagTTCCTATGCCACTACATATAATATCTGAATCATTTTGAGACTCTGGAAAGTGGCCTCCAATGTGTTGCAGCATTGGTttctctaatacataaaataaacatctCCTGTAATGTCA

Function

GO:

id name namespace
GO:0006000 fructose metabolic process biological_process
GO:0006003 fructose 2,6-bisphosphate metabolic process biological_process
GO:0005829 cytosol cellular_component
GO:0003873 6-phosphofructo-2-kinase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0004331 fructose-2,6-bisphosphate 2-phosphatase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-120222-1 Predicted to enable 6-phosphofructo-2-kinase activity and fructose-2,6-bisphosphate 2-phosphatase activity. Predicted to be involved in fructose 2,6-bisphosphate metabolic process. Predicted to act upstream of or within fructose metabolic process and phosphorylation. Predicted to be active in cytosol. Orthologous to human PFKFB2 (6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2).

Ensembl:

ensembl_id ENSDART00000156276

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008464 lncRNA downstream 228833 18551830 ~ 18556014 (-) True XLOC_004088
TCONS_00008463 lncRNA downstream 234963 18547015 ~ 18549884 (-) False XLOC_004088
TCONS_00007789 lncRNA downstream 636359 18146659 ~ 18148488 (-) True XLOC_004082
TCONS_00007788 lncRNA downstream 637892 18144285 ~ 18146955 (-) False XLOC_004082
TCONS_00007784 lncRNA downstream 782568 17998053 ~ 18002279 (-) False XLOC_004081
TCONS_00008466 lncRNA upstream 49627 18849926 ~ 18852369 (-) False XLOC_004092
TCONS_00008465 lncRNA upstream 49627 18849926 ~ 18852369 (-) False XLOC_004092
TCONS_00008785 lncRNA upstream 49971 18850270 ~ 18852070 (-) False XLOC_004092
TCONS_00008784 lncRNA upstream 49971 18850270 ~ 18852070 (-) True XLOC_004092
TCONS_00008786 lncRNA upstream 288115 19088414 ~ 19091101 (-) True XLOC_004093
TCONS_00007804 mRNA downstream 79544 18704191 ~ 18705303 (-) True XLOC_004090
TCONS_00007802 mRNA downstream 180305 18560996 ~ 18604542 (-) False XLOC_004089
TCONS_00007801 mRNA downstream 180530 18560667 ~ 18604317 (-) False XLOC_004089
TCONS_00007800 mRNA downstream 182892 18560667 ~ 18601955 (-) False XLOC_004089
TCONS_00007796 mRNA downstream 226918 18531984 ~ 18557929 (-) False XLOC_004088
TCONS_00007812 mRNA upstream 2003 18802302 ~ 18819178 (-) True XLOC_004091
TCONS_00007813 mRNA upstream 295132 19095431 ~ 19097746 (-) True XLOC_004094
TCONS_00007816 mRNA upstream 690036 19490335 ~ 19501440 (-) False XLOC_004097
TCONS_00007817 mRNA upstream 694640 19494939 ~ 19501439 (-) True XLOC_004097
TCONS_00007818 mRNA upstream 711343 19511642 ~ 19598809 (-) False XLOC_004098
TCONS_00007803 other downstream 180412 18591999 ~ 18604435 (-) True XLOC_004089
TCONS_00007777 other downstream 876165 17906902 ~ 17908682 (-) True XLOC_004078
TCONS_00007763 other downstream 2140334 16644397 ~ 16644513 (-) True XLOC_004067
TCONS_00007758 other downstream 2447961 16332824 ~ 16336886 (-) False XLOC_004066
TCONS_00007751 other downstream 2657169 16127382 ~ 16127678 (-) True XLOC_004063
TCONS_00007814 other upstream 380153 19180452 ~ 19180555 (-) True XLOC_004095
TCONS_00007815 other upstream 615879 19416178 ~ 19416315 (-) True XLOC_004096
TCONS_00007850 other upstream 2779627 21579926 ~ 21585161 (-) True XLOC_004113
TCONS_00007852 other upstream 2952176 21752475 ~ 21752589 (-) True XLOC_004115
TCONS_00007863 other upstream 3796815 22597114 ~ 22599555 (-) True XLOC_004120

Expression Profile

//