RNA id: TCONS_00007814


Basic Information

Item Value
RNA id TCONS_00007814
length 104
RNA type snRNA
GC content 0.39
exon number 1
gene id XLOC_004095
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 19180452 ~ 19180555 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GtgtcgctacggtggcacatatactaaaattgaaTCAATACATAAAAGATTAGCATGCCCCCttaaaggatgacacgcaaatgcGTTAATCGCTCCATATGTAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000115774

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008786 lncRNA downstream 89351 19088414 ~ 19091101 (-) True XLOC_004093
TCONS_00008466 lncRNA downstream 328083 18849926 ~ 18852369 (-) False XLOC_004092
TCONS_00008465 lncRNA downstream 328083 18849926 ~ 18852369 (-) False XLOC_004092
TCONS_00008785 lncRNA downstream 328382 18850270 ~ 18852070 (-) False XLOC_004092
TCONS_00008784 lncRNA downstream 328382 18850270 ~ 18852070 (-) True XLOC_004092
TCONS_00007830 lncRNA upstream 911889 20092444 ~ 20095839 (-) False XLOC_004102
TCONS_00007831 lncRNA upstream 914065 20094620 ~ 20095481 (-) True XLOC_004102
TCONS_00008787 lncRNA upstream 1771501 20952056 ~ 20953249 (-) True XLOC_004104
TCONS_00008788 lncRNA upstream 1937065 21117620 ~ 21119973 (-) True XLOC_004108
TCONS_00008789 lncRNA upstream 2713047 21893602 ~ 21906011 (-) False XLOC_004116
TCONS_00007813 mRNA downstream 82706 19095431 ~ 19097746 (-) True XLOC_004094
TCONS_00007812 mRNA downstream 361274 18802302 ~ 18819178 (-) True XLOC_004091
TCONS_00007811 mRNA downstream 361739 18799186 ~ 18818713 (-) False XLOC_004091
TCONS_00007810 mRNA downstream 361812 18799186 ~ 18818640 (-) False XLOC_004091
TCONS_00007805 mRNA downstream 380153 18784847 ~ 18800299 (-) False XLOC_004091
TCONS_00007816 mRNA upstream 309780 19490335 ~ 19501440 (-) False XLOC_004097
TCONS_00007817 mRNA upstream 314384 19494939 ~ 19501439 (-) True XLOC_004097
TCONS_00007818 mRNA upstream 331087 19511642 ~ 19598809 (-) False XLOC_004098
TCONS_00007819 mRNA upstream 334326 19514881 ~ 19585859 (-) False XLOC_004098
TCONS_00007820 mRNA upstream 387183 19567738 ~ 19576890 (-) True XLOC_004098
TCONS_00007803 other downstream 576017 18591999 ~ 18604435 (-) True XLOC_004089
TCONS_00007777 other downstream 1271770 17906902 ~ 17908682 (-) True XLOC_004078
TCONS_00007763 other downstream 2535939 16644397 ~ 16644513 (-) True XLOC_004067
TCONS_00007758 other downstream 2843566 16332824 ~ 16336886 (-) False XLOC_004066
TCONS_00007751 other downstream 3052774 16127382 ~ 16127678 (-) True XLOC_004063
TCONS_00007815 other upstream 235623 19416178 ~ 19416315 (-) True XLOC_004096
TCONS_00007850 other upstream 2399371 21579926 ~ 21585161 (-) True XLOC_004113
TCONS_00007852 other upstream 2571920 21752475 ~ 21752589 (-) True XLOC_004115
TCONS_00007863 other upstream 3416559 22597114 ~ 22599555 (-) True XLOC_004120
TCONS_00007873 other upstream 3978634 23159189 ~ 23159307 (-) True XLOC_004123