XLOC_004102 (ogfrl2)


Basic Information

Item Value
gene id XLOC_004102
gene name ogfrl2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 20091255 ~ 20096018 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007829
TTTTGTCATGTGGCGTGAAACCTTTGCAGAACATTTGAGCAACACCTGGCAACCCTTAAATAAGCCCTGCATTTCCTTGTTGTTGAACTACGCCAGAAATGCCGTCGGTTCACCGTTTcaactttcattttcacttaatGGTGGGAGGGCTTTTTGCTCGATGTACTTAAAGCTGGTAACATTTCTGAGGTGTCTGAAGTCTTGGTTCTTTGGCCTGTTAAGGTTTACACATAATTTGTTTGCTCGTACTTGGTTTCGTCGTATTAATAGTAGTTTGCGGTCTACTAAACATATTAGTATGGAGTCAGATGATGATTGCGACTGCGAGTTGGACTCCACATGggaagatgaagatgaaaacaaaacacccaATGAGAAGCTCAAGAAGAGTCGCAGGAACATGTATGCAGCCAAGGACATGCAAGACTTCCGGCATCGTTGCCTGGAACTAGATGATGACTATGAGGAGGATTATACCATGGAAAAAGAAGATGATGCATTTCAGATTAATCCCCTATATCATCTGAAGTTTTACAGAGGTGAAATAAAAGCTGCGCCAGTCGCTATTCACATTGATGGTTTTCACAAAGACTGGTGGGGTCAATATGATTTGCTTGAAAAGGCTCACTACTACATTCAATGGCTATTTCCAATACAAAGGAAAGTTAACAACTGGAGAATACATTGTCTCAGAAAAAAGGAAATTATGCTATTCCGCAGAGATGAGgatgtaaaacataagctgatcAAATCATATAAAGTCATGTTGGATTTCTATGGAATACGTTTGGCTGATGAAAAAACAGGAAAGGTGGAACGTGCCGAGAATTGGAAGCAACGCTTTAACAACTTGAACAGAAATACTCACAACAACCTGCGCATCACACGCATCCTGAAGTGTTTGGGGACTTTAGGATTGGAGCACTATCAGGCACCACTTGTCAAGTTTTTCCTCCATGAGACTTTGTTTCAAGGACAACTtaagaatgtcaaacaaagtgTACTAGATTACTTTATGTTTGCAGTTTTGGACAAATCAAAGAGGAGGGAACTGATTAGATATGCTTATTTGTATTTCAAACCCAGAAAAGACTTTGTCTGGGGCTCAAAGAAGATTCTGAAAGTGAAAACTTATCCTTGGGACTGCCATCATGAAATGACCAAAATACATGCCAGTCTTCCACCTGAAGAGATGGGAAGTGACAATAAAAATGATGACCAGAAAGATGATGCAGTTAGTCAAAACAGACTGAAGGGAGAATGTTCAAAGTCATCAAAGGGAAACTAATGGGAACAGTCAAAGTAGCTCAAATGGTGACCAGATAGTCCAGAGAAGATGAATGAAGAGAGTGAGTCAAATGATAAGAACAGTCTGTACAGCTTAGGCAATGAATGTGTAAAAGAGCAAAACCAAAAGAGTAGTGCTGATGGTAATAATGAAGTCCACATGACACCACAAAATAAACCTAATGGTAATTCTGATGAAAGTAATCTAGCTGAAATTAGGAAAACTAATGAAAATGACATGCTAGACAACCCTGAAGTTGAAATGAAAGAAGATGGCATGTCTCATGGTGATAATGGTAACAATGCTGAAAAAGAGAGGCCAGGGAGTCCATGCAAGTTGACCGAACAAACTAATAGTCAGGATAAGAGGTCAAATGTTGAGACAAATGATGAAGATGAAAGTAATCTAAATAATACAGCGTATACTAAAGAAATGTCAGCAGAACATGAGCAGGGATCAAATAATGAAAACAGTCAGTGCAACTCAGAAAATGAAACTGTACAAGACCAAAATCAAGAGATGAGTGCTGATGGTGTTGGTGATGAGTAGTGAAAGTTTGTCCATGAAGGGTGTACTTGTCTGACATGGAAAAAAAGGAAACTGACAACAGAAAGTATCAAggcctttaatgtttttttttttttttggttgttccccaaaataaattacatgaaatataTTGAAACGCCTGTATGCCTGGGCTCAAATTCAACTCTTTGAGATgcattgctttgttttgtttatttaacagaTTGACTAATGGAGATTAAAAATAGCATGCAAAAGCTAAATTTGCACTGTAAcaaatgtaatgttattattttttttgttttattttttgtgaagtgTTCTAATAAGTTTGTCTTGAACTTGATTGTTTAATAAGAAATGAAGTTCTGATTAACCAAGTGATGATTGAtgcaaataaaaattgtattgatAAAGCAAGATCACACTTTGAAAACTGGCTCCAATAATTGTTAGATTTGTATGCTTTCTTTTGTAATGGATGAACCTGTTGAAGTTTGTAAAACGATGcagttttgttttgggtttttgcTGGTGACCAAATAAATGTCATATCACTGAATGATGTGTTTTGTATATCACTGTGCTTGTAAGCATTGAACATATTTCTATGTTTTCTGTCACATCACTGATATCTACAAAATATAaaggttttttaaaataaattactttagaTTATATTGAATGTGCTATTACATCATAGCACACTAAAAACAATGCACACTATGCATATTTAATGGTAG
>TCONS_00007830
CATTTCTGAGGTGTCTGAAGTCTTGGTTCTTTGGCCTGTTAAGGTTTACACATAATTTGTTTGCTCGTACTTGGTTTCGTCGTATTAATAGTAGTTTGCGGTCTACTAAACATATTAGTATGGAGTCAGATGATGATTGCGACTGCGAGTTGGACTCCACATGggaagatgaagatgaaaacaaaacacccaATGAGAAGCTCAAGAAGAGTCGCAGGAACATGTATGCAGCCAAGGACATGCAAGACTTCCGGCATCGTTGCCTGGAACTAGATGATGACTATGAGGAGGATTATACCATGGAAAAAGAAGATGATGCATTTCAGATTGTCAGAATTTGctatttacaatgtttataaACCATATTTTAAAGTATAATTTACCTGCATCTCTGGTGTAATGCTAGATTTGATTTGTATGAAATGCTTGAGAaattgttgcatttatttatatatatatatgtgtgtgtgtgtgtgtgtgtgtgggtatataTTGTTGTTGTCATCCCCTAGAATCCCCTATATCATCTGAAGTTTTACAGAGGTGAAATAAAAGCTGCGCCAGTCGCTATTCACATTGATGGTTTTCACAAAGACTGGTGGGGTCAATATGATTTGCTTGAAAAGGCTCACTACTACATTCAATGGCTATTTCCAATACAAAGGAAAGTTAACAACTGGAGAATACATTGTCTCAGAAAAAAGGAAATTATGCTATTCCGCAGAGATGAGgatgtaaaacataagctgatcAAATCATATAAAGTCATGTTGGATTTCTATGGAATACGTTTGGCTGATGAAAAAACAGGAAAGGTGGAACGTGCCGAGAATTGGAAGCAACGCTTTAACAACTTGAACAGAAATACTCACAACAACCTGCGCATCACACGCATCCTGAAGTGTTTGGGGACTTTAGGATTGGAGCACTATCAGGCACCACTTGTCAAGTTTTTCCTCCATGAGACTTTGTTTCAAGGACAACTtaagaatgtcaaacaaagtgTACTAGATTACTTTATGTTTGCAGTTTTGGACAAATCAAAGAGGAGGGAACTGATTAGATATGCTTATTTGTATTTCAAACCCAGAAAAGACTTTGTCTGGGGCTCAAAGAAGATTCTGAAAGTGAAAACTTATCCTTGGGACTGCCATCATGAAATGACCAAAATACATGCCAGTCTTCCACCTGAAGAGATGGGAAGTGACAATAAAAATGATGACCAGAAAGATGATGCAGTTAGTCAAAACAGACTGAAGGGAGAATGTTCAAAGTCATCAAAGGGAAACTAATGGGAACAGTCAAAGTAGCTCAAATGGTGACCAGATAGTCCAGAGAAGATGAATGAAGAGAGTGAGTCAAATGATAAGAACA
>TCONS_00007831
TCAAGAAGAGTCGCAGGAACATGTATGCAGCCAAGGACATGCAAGACTTCCGGCATCGTTGCCTGGTGAGTTTCATTAACTTGTATAAGATAAGATATACCTATGTGAGAGAGAGTAAGAGCCACTTTTAAACTCTTCACTAGGCAAGAAGAGCTAGAGTTAAAGAGTACAGCCATAAATATGCCTGTTTAAAAAGAAAGCTTCTGAACACATGACATGATGAAGTATCTCACTGACATGTCTTTCTCCACTTTCTTTTCTGTCAAATAAACATGCCAGCTCACATTGGTCCACTGACGTGTGTGGGAAAAATtacagatttgtttgtttgtttgtctctaGGAACTAGATGATGACTATGAGGAGGATTATACCATGGAAAAAGAAGATGATGCATTTCAGATTGTCAGAATTTGctatttacaatgtttataaACCATATTTTAAAGTATAATTTACCTGCATCTCTGGTGTAATGCTAGATTTGATTTGTATGAAATGCTTGAGAaattgttgcatttatttatatatatatatgtgtgtgtgtgtgtgtgtgtgtgggtatataTTGTTGTTGTCATCCCCTAGAATCCCCTATATCATCTGAAGTTTTACAGAGGTGAAATAAAAGCTGCGCCAGTCGCTATTCACATTGATGGTTTTCACAAAGACTGGTGGGGTCAATATGATTTGCTTGAAAAGGCTCACTACTACATTCAATGGTAAGTTTCACTTAatccatttaaatgtatttaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000024815

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007829 False 2559 mRNA 0.36 8 20091255 20096018
TCONS_00007830 False 1374 lncRNA 0.38 7 20092444 20095839
TCONS_00007831 True 756 lncRNA 0.36 2 20094620 20095481

Neighbor

gene id symbol gene type direction distance location
XLOC_004101 C11H3orf14 coding downstream 19348 19991633 ~ 20071907 (-)
XLOC_004100 namptb coding downstream 316073 19729771 ~ 19775182 (-)
XLOC_004099 SYNPR coding downstream 396921 19622925 ~ 19694334 (-)
XLOC_004098 atxn7 coding downstream 492446 19511642 ~ 19598809 (-)
XLOC_004097 slc2a9l1 coding downstream 589815 19490335 ~ 19501440 (-)
XLOC_004103 taf4a coding upstream 791428 20887446 ~ 20988238 (-)
XLOC_004104 NA coding upstream 856038 20952056 ~ 20953249 (-)
XLOC_004105 CABZ01008739.1 coding upstream 857908 20953926 ~ 20956309 (-)
XLOC_004106 slc6a14 coding upstream 898008 20994026 ~ 21014572 (-)
XLOC_004107 fmoda coding upstream 929877 21025895 ~ 21031773 (-)
XLOC_004063 CR854846.1 misc downstream 3963577 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 7399564 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 7469488 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 7499959 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 7577993 12512966 ~ 12513262 (-)
XLOC_004096 BX511159.1 non-coding downstream 674940 19416178 ~ 19416315 (-)
XLOC_004095 CT737428.1 non-coding downstream 910700 19180452 ~ 19180555 (-)
XLOC_004093 NA non-coding downstream 1000154 19088414 ~ 19091101 (-)
XLOC_004092 NA non-coding downstream 1238886 18849926 ~ 18852369 (-)
XLOC_004082 LO018315.7 non-coding downstream 1942767 18144285 ~ 18148488 (-)
XLOC_004108 NA non-coding upstream 1021602 21117620 ~ 21119973 (-)
XLOC_004115 CT573222.1 non-coding upstream 1656457 21752475 ~ 21752589 (-)
XLOC_004116 NA non-coding upstream 1797584 21893602 ~ 21906060 (-)
XLOC_004117 NA non-coding upstream 1993417 22089435 ~ 22094397 (-)

Expression


Co-expression Network