RNA id: TCONS_00007811


Basic Information

Item Value
RNA id TCONS_00007811
length 6220
RNA type mRNA
GC content 0.41
exon number 15
gene id XLOC_004091
representative False

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 18784847 ~ 18819178 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CATACTGCTTGCAGGCGTTTTCTTTTTAATGTCAACGATAATGACATACACTTGAATGTCTTGCTCTTTCGAGGAATGGAATTTCCAGTGAACCACACTGCTGTCTGAGATGAGCTGAGctaatgtatttcaaatatggCAGGAATAGCATGGTATCAGAAAAAAGTGAGTGTGTCTATACCTGTCAGGTAAACAGAGGTTGTTTTTAGAAAGGAGTTAAAATGTCTGTCGTGTTCTTGTCAAAGATTGGAGCTTATGATCAACAGATTTGGGAAAAATCACTGGAACAGACTGAGTTTAAGGGCTTTGGAAACAAACTTAAAAAGACTGGCCATATTAAGCCAGATCTCATTGATGTCGATCTAGTAAGAGGTTCCACATTTAGCAAAGCTAAGCCAGAAAGCCCTTGGACGGCTCTGACTCGTAAAGGCTTGGTTCGAGtccttttctttcctttcttttttcaaTGGTGGATCCAAGTCACGTCTAAATGCATCTCCACCCTCATTTTGGTTCTCTACGTGCTTCAAGTGGCAGGAGCTGTGCTGTATTTTGAGGTACCAGCAGCCTGTGCTAGTGAAGTTGTTGGTCCATTGTGTCTAATGCTGTTGTTGGGAACAGTGCATTGCCAAATAGTATCCACGGAATCCTCCAGAAGCCCAGACATCAGCCCTGTCCACAGCCGGACAGCCAGCCCTATTCGCAGGAAAAGACAGAGGAAGAGTAGAAAAGCCAAGAGGTCTGGGGATGAAGGAAGTCGAGTAGCAGGGATAGTAGAACTCAAACCCTGGCAACTTGAAGACAACCATCGGCTCTACAGATCAGAGAAGACTCTGAACTCCCTGAGGAGGCCTCCATATGGGGCATCTGAAGATCTGTCcagtgaagaagaagaagaagaagcagaagaAGCAGAACTACAAAAAGAGAGGCTCTTTTCATCAGCGCCTCCCAAATATGCCAGCGCGCTGAGAAACAGACTTCACAACGTTCCCAAGAACAATGTACAACCCCAGGCTCAGGGAGAGAGCAATGGCATGCCAACAGAAATCCCAGGGCTGCCACGTGAAGTTGAGCATCTACGGCCTTCAGAGGGATCGCATCCTGCTTCTGATACAGATGATATGTTGTGGGAGGAGCTTTTACAAGATTCTGACTCCGCCTCCACAGGAAGTAGTGAGATTGGGGAGGACGAGCCTCACAGTCAAAGCCACTCCCTTCCTGTGCCCACTATTGCTTTAACAAGtgatgaggatgaggatgagAATGAGGCCTTACCGCAGCACCAGTTTTCATGGCTGCAAGCTTGTCACCCATCCAAAGACCGTGTCAGTGCCATTATCTGGGAGCAAGGAGAGTGTAAGAAAGCTGACATGTCGGTGCTGGAGATCAGTGGTATCATTCTCACACGAGTAAAGGTGGTTGAACAGGGGATGGGTTATCTGATTTTCGGTGGTCTGGTCACTGCATCACTGGCTCTGCTGCCCTACTGCTTCAGACTGGCACAGAAACTGGATCTCAGTGCGATTTCCCTGGAGGATCTGCCAGCAGTGGCCATCGGGTCGCCTTGTGCCTTCTCCTATGCGTTTTTCATCATCGCCACTATGGAAAGAGTTTTCCTCTGTGGACTCTTCTTCTTCATGATGTGTGTCGCTGAGAGGACGTATAGACagCGCCTTTTATTCGCAAAACTCTTCAGCCATCTTACATCTGCACGCAAAGCCAAAAAATCAGAGATTCCTCACTTTCGGCTCAAGAAAGTACAGAATATCAAGATGTGGCTTTCCCTTCGATCATTCCTGAAGagacGAGGCCCTCAGCGGTCTGTCGATGTCATTGTATCATCAATTTTCCTCTTGGCTTTGTCTATTGCCTTTATCATCTGTGCACAGCTTCTGCACAGTCACCACACATTTCTGGATTCAGAGACCAACTGGGAGCTGGTGGTGTGGTGTGCAGCTCTCATGGTCTTCCTCCTCCGTCTCGCAACACTTGGAGCAGAGACCAACCGAAAATACAGCAATGCTTCTGTGCTTCTGACTGAACAGATCAACTTGTATCTTAAAATGGAGAAGAAACCCAACAAAAAGGATCAGTTGAACATAGTGAACAATGTGCTGAGGCTGGCCACCAAATTACTGAAAGAATTGGACACTCCATTTCGTCTGCTAGGCCTGACGGTGAACCCGCTCATCTACAATATCACACGAGTGCTCATCCTGTCTGCCGTTTCTGCTGCTGTCAGCGATTTATTAGGGTTCAACATCCGGCTCTGGAAGATCAAACCATGATGACTTTTACACTGCCAGCGTCTTAACACTGGGGGCCAGAGAGACTCTTAAAGCGACTAGATGACCAAGTAGTTGTCTTTTTAAAAAACTGTGCAAATCTACTGACCAAACGTatgcattttttcttttgtacCCTGTACCTTTGGCTAGACTGAGCAAACCTGTGTTCAACTCTGCATTCTTGTTGAGTTTTCCTCTTATTCCTTGAGTCGTTtaaaaaagcacaacaaaatTGTAATGGCTTTTCTTGATGCACTTGCTTACTGTAACAACTTAACAGTTATATTACAAGCAGTGGTCGCCGTTTCCCATAAATGTAGCCACTGCGAGTGTATTATGTGGTTTGGATTCAACCACTTAAAACAGAACCACTATGTGCCTTGTGAATAATTGCATATGACAGTACTTTTAGATAAGCTATTTATGAGATATGGATTTGTCAACTGCTGAATGGGGCAATTCAATTGAGATTTTTAAGAAAAGGGTACTGAAAATCTTGCACACTGAAGCTCTTGGAGGAGCACTTTCTACTGGCATTGTATAAAAATAAACCTTTCTCCAAGATTCTTCCTTAATCATCAATCCTTAAGCAAATATTTGAGGTTTGGGAGGTTGAATAAATGTGAATGTCGAATGTGATGGGTCTGGTGACCCTTCCTCCTGACTATTAAATATGCAGAAAAAGCAAAAGAgttctatttatttttgtttcgttATTGTTAGTTTCTGTTTAGTTACAAGAAATGTAAATGTGttgatttgagttatttttaagAAACTATTTTACGTTATAATAAAATACGTTAAACGAAATTAGAATTGCATAAAATGttcgtttaaaatgaacaaatcataAAAGCTATAGTAATTATGAACGACTATCAGTTGGCTCACAAGATTAGACACAAACCGGGAGGAGACCCATGACTTTATAGTTTACTAAgttaaaaagcaaagaaaaaaacagtaatttaagGCCCTGctatatttgttatttgtaatttcatatacacgtAACCACAATTGGGGGGCGTCACAGaggtgcagtgagtagcacgatcacctcaaagcaagaagatggctggttcgaaccccggctgggtcagttggcatttctttgtggagtttgcactttctcctcatgttcgcgtgggttttctctgggtgctccggtttcccccacagttcaaagacaagtgctataggagaattgattaagctaaattggccgtagcatatgtgtgtgaatgcaagggtgtatgggttgcagctggaagggaatctgctgtgtaaaacatatgctgaataagttggcggttcatcccgctgtggtgaccccttagaaaataaagtgattaagccaaaaagaaaatgaatgaaagaataccCACAATTTGTTACATcatcataaagataatcatgtttatataaacactataaactaggaggacttctctcctcctcagtccccgggtctgaatgcagacacagtggatagcagtacaGCCCGtgtcttgccctgtctatttcaagCATTAGGCTTGCCAGTAATCTGTAGGTTTTTACACAGGCGAAAACAGCAGCACCGATAGGCGATGTGTCTTAAATTGTAACAAACTGGACTGATAAAAGAAAAGTCCTCCATTCTCCAATAATCATATAGCTCTCCAGACtccaaacaaaaatgcttgctgcacactaacagctttgctgtatcagccctgacaTCATTGTGgggaaaaacatacaacaaacctgttgatcatggaaacaaacaaacacacacgaccctttatgaacagctaaatactgcgtGCTGTGCGTGTATGCAGTATCActgcttggcaggtctgccttgccttcggaaagcatgtgcagtCAAAAAGAATTAAGAAAATAGCAACATTTACAACTTTGATTTGAAGGAAAACTATTCTCAACGatacaaaattgtatttttggTGGTAATTTAACATCATGAGGATATAATTATTTGTGGGGCTTCATGGTGTCTGTTTGGATTTGTTCATCTTTATGTGGCGCTGCACAGCCTGATTGGTCAATTAAAACCAGAGAACCTCTTAAGTAATTGGAGAGTTGACAGCAGCTTACATCATCAATCTCAATGGAAAGTTTTTACATAGTTTGAATCATTTATCTCCTATATACAGTACTACACTGTGTGCCTTTCACCACATGCAGTAGAAAATGGTAATTATATGTACAAGTGACAGGTTTCACAGTTTTTGCATCTATCAAAAGTTAACTGTAGGACACTTTAGAttctagaaagcatttgattgggcAGACTATCTCACAAGTGCAGAGTGATGTCATCAAAATGGTTGATCCGTGTTTGATAATTTATATATTCTCAATTTTTTAGGAGAAAACTAGCTAATAGATCActttaaattcagttttgatttcttggAATTTTTAAGAGATCAAATTAAATGTGTAGGTCTGTGCTCAAAAAAAGGGGACAGGCTAACAGtttttgtaaaagaaaataataataaataaataaatatctaaataaatagctcattttaaaaaaatgacaaaaaaacataGAGTGTATAATTCTGGAACCCGACTGTAGTCTGACTCTACACTGACCGGATCAGTTTACGAGTCGATTGAAAAGATTGACTAATATGAATCAAACCACGATATGACTGACTTCCCAGTTCAGTTTGCTGCAGGTATTACGGTAAGTAAACGGTGACGTATGGACACACCTTCACTCACGCGCTTGGCTCTGGTTGCCATGGAAGGTTATCAAGTGCAAAAACCGGCTGAGGCAACGACAGCACCTGGCGGAAACATACTGAACTTACCGGTGGAACCTGGAAGATACGGAGTAAAACACGGACCTCTTGAGGTAGAATGTCAACGATTTGGAAACAGTATGGTTATATGTGTCTCGCGATAGTGCTTCTTTAATATGTGTACAATAAGATTTTATATGCGTATGGATTAAACTGTCAGTAAATGTTGAAAAGCCCTCATCCAAAGGTTAACGGTAATGACGTAGCACGATATTCTCAGCATCCTTTTCTACGTAATGACGTATCTGTATTACTGCGCTAAATAAGTGccaagaataaaagctgtttgtcACTGAGTAGAGCATAATCTACGCAAACACTAGTAATTTCCACTAACGTAGAATGCGTATATTGTCATTATTTCGCCGTTTGTGTTCGTCTCTCTGCAGGTGTGCCTGTCTTTGCAGCActaagagtgagtgagtgattaggTCTGTCAGATACAGATTCAGTATGTCTGCATGGCTGCAGCAGGAGGAGGCTGGTCCAACCAGTTCTGCTGAAGCCAAGAAATCAGAGCCTAGAGGCCAAGAGAAGAAATGCTGTAAGTACACAGGCTTTCGTGTCCCACTGATCTAAAATGTTTCGTGGGTTTTTGAGAGGTTTAGGGGGCTCCTCAGTTGATGTTTACTGCATGACAGATTTGTTCCCTGGCCCTGTTAAGTTTAACGACGGCCCTGAATCATATCACAGTTGTCCTTCTTGTGGTGTCAGCTGTTACTGAACAGCCAAACAGAAGTTCACTGTCAGGCtgggttataaaaaaaaaagaaaactgctgtgctGCCCTTTATTTAGATTGTCAGCATTGTCTGTTATGCTGGTTTCAAATTGCAGATCAAGGTAAAAGGCGCACTTTTTAGTGTTTaggattatttgtgtgtgtgtgtatgtgagtgtgttttaataaattgttGCCTGGATGTAATCTTTTATTTCGCATAATAtctttattatttgaatatttttaaataaaaacatttcaaaaagatATTATCAGCACTGCTTTTTCAACATTTATAATCATTACaaatgtttctaatgcagcaaatgaatgaacttttaaaGGTCATGTGACATTAAAGACTGGTGCTT

Function

GO:

id name namespace
GO:0006000 fructose metabolic process biological_process
GO:0006003 fructose 2,6-bisphosphate metabolic process biological_process
GO:0005829 cytosol cellular_component
GO:0003873 6-phosphofructo-2-kinase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0004331 fructose-2,6-bisphosphate 2-phosphatase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080204-123 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human PHTF1 (putative homeodomain transcription factor 1).

Ensembl:

ensembl_id ENSDART00000190055

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008464 lncRNA downstream 243172 18551830 ~ 18556014 (-) True XLOC_004088
TCONS_00008463 lncRNA downstream 249302 18547015 ~ 18549884 (-) False XLOC_004088
TCONS_00007789 lncRNA downstream 650698 18146659 ~ 18148488 (-) True XLOC_004082
TCONS_00007788 lncRNA downstream 652231 18144285 ~ 18146955 (-) False XLOC_004082
TCONS_00007784 lncRNA downstream 796907 17998053 ~ 18002279 (-) False XLOC_004081
TCONS_00008466 lncRNA upstream 31213 18849926 ~ 18852369 (-) False XLOC_004092
TCONS_00008465 lncRNA upstream 31213 18849926 ~ 18852369 (-) False XLOC_004092
TCONS_00008785 lncRNA upstream 31557 18850270 ~ 18852070 (-) False XLOC_004092
TCONS_00008784 lncRNA upstream 31557 18850270 ~ 18852070 (-) True XLOC_004092
TCONS_00008786 lncRNA upstream 269701 19088414 ~ 19091101 (-) True XLOC_004093
TCONS_00007807 mRNA downstream 7352 18786143 ~ 18791834 (-) False XLOC_004091
TCONS_00007804 mRNA downstream 93883 18704191 ~ 18705303 (-) True XLOC_004090
TCONS_00007802 mRNA downstream 194644 18560996 ~ 18604542 (-) False XLOC_004089
TCONS_00007801 mRNA downstream 194869 18560667 ~ 18604317 (-) False XLOC_004089
TCONS_00007800 mRNA downstream 197231 18560667 ~ 18601955 (-) False XLOC_004089
TCONS_00007813 mRNA upstream 276718 19095431 ~ 19097746 (-) True XLOC_004094
TCONS_00007816 mRNA upstream 671622 19490335 ~ 19501440 (-) False XLOC_004097
TCONS_00007817 mRNA upstream 676226 19494939 ~ 19501439 (-) True XLOC_004097
TCONS_00007818 mRNA upstream 692929 19511642 ~ 19598809 (-) False XLOC_004098
TCONS_00007819 mRNA upstream 696168 19514881 ~ 19585859 (-) False XLOC_004098
TCONS_00007803 other downstream 194751 18591999 ~ 18604435 (-) True XLOC_004089
TCONS_00007777 other downstream 890504 17906902 ~ 17908682 (-) True XLOC_004078
TCONS_00007763 other downstream 2154673 16644397 ~ 16644513 (-) True XLOC_004067
TCONS_00007758 other downstream 2462300 16332824 ~ 16336886 (-) False XLOC_004066
TCONS_00007751 other downstream 2671508 16127382 ~ 16127678 (-) True XLOC_004063
TCONS_00007814 other upstream 361739 19180452 ~ 19180555 (-) True XLOC_004095
TCONS_00007815 other upstream 597465 19416178 ~ 19416315 (-) True XLOC_004096
TCONS_00007850 other upstream 2761213 21579926 ~ 21585161 (-) True XLOC_004113
TCONS_00007852 other upstream 2933762 21752475 ~ 21752589 (-) True XLOC_004115
TCONS_00007863 other upstream 3778401 22597114 ~ 22599555 (-) True XLOC_004120

Expression Profile

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