Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU373292 |
| length | 205 |
| lncRNA type | intronic |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G315175 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 5461387 ~ 5461591 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU373289 | lncRNA | downstream | 12258 | 5448924 ~ 5449129 (-) | True | G315172 |
| TU373256 | lncRNA | downstream | 127508 | 5333669 ~ 5333879 (-) | True | G315142 |
| TU373255 | lncRNA | downstream | 129234 | 5331894 ~ 5332153 (-) | True | G315141 |
| TU373188 | lncRNA | downstream | 233770 | 5227228 ~ 5227617 (-) | True | G315075 |
| TU373172 | lncRNA | downstream | 241558 | 5219549 ~ 5219829 (-) | True | G315069 |
| TU373331 | lncRNA | upstream | 102972 | 5564563 ~ 5564775 (-) | True | G315213 |
| TU373343 | lncRNA | upstream | 149163 | 5610754 ~ 5610980 (-) | True | G315225 |
| TU373511 | lncRNA | upstream | 261359 | 5722950 ~ 5723322 (-) | True | G315381 |
| TU373526 | lncRNA | upstream | 438519 | 5900110 ~ 5900708 (-) | True | G315393 |
| TU373755 | lncRNA | upstream | 761764 | 6223355 ~ 6224613 (-) | True | G315595 |
| XM_026941094.2 | mRNA | downstream | 14214 | 5384557 ~ 5447173 (-) | False | schip1 |
| XM_026941096.2 | mRNA | downstream | 33017 | 5384557 ~ 5428370 (-) | False | schip1 |
| XM_026941097.2 | mRNA | downstream | 44679 | 5384557 ~ 5416708 (-) | False | schip1 |
| XM_026941095.2 | mRNA | downstream | 52278 | 5384557 ~ 5409109 (-) | False | schip1 |
| XM_026941014.2 | mRNA | downstream | 84417 | 5371068 ~ 5376970 (-) | True | il12a |
| XM_026941491.2 | mRNA | upstream | 232073 | 5693664 ~ 5709552 (-) | False | mfsd1 |
| XM_026941492.2 | mRNA | upstream | 234677 | 5696268 ~ 5709552 (-) | True | mfsd1 |
| XM_026941242.2 | mRNA | upstream | 254998 | 5716589 ~ 5730765 (-) | True | gfm1 |
| XM_034314895.1 | mRNA | upstream | 271162 | 5732753 ~ 5734846 (-) | True | LOC117599999 |
| XM_026940871.2 | mRNA | upstream | 283816 | 5745407 ~ 5756063 (-) | False | mlf1 |
| trnat-agu_16 | other | downstream | 239552 | 5221762 ~ 5221835 (-) | True | trnat-agu_16 |
| trnat-agu_15 | other | downstream | 240371 | 5220943 ~ 5221016 (-) | True | trnat-agu_15 |
| trnat-agu_14 | other | downstream | 240853 | 5220461 ~ 5220534 (-) | True | trnat-agu_14 |
| trnas-aga_15 | other | downstream | 1834940 | 3626366 ~ 3626447 (-) | True | trnas-aga_15 |
| TU371730 | other | downstream | 2146295 | 3313304 ~ 3315092 (-) | True | G313817 |
| XR_003404409.1 | other | upstream | 866077 | 6327668 ~ 6327776 (-) | True | LOC113543401 |
| XR_003404412.1 | other | upstream | 1008744 | 6470335 ~ 6470426 (-) | True | LOC113543404 |
| XR_004576924.1 | other | upstream | 2380311 | 7841902 ~ 7842020 (-) | True | LOC117595747 |
| XR_004576920.1 | other | upstream | 2382399 | 7843990 ~ 7844108 (-) | True | LOC117595743 |
| XR_004576926.1 | other | upstream | 2384461 | 7846052 ~ 7846170 (-) | True | LOC117595749 |
