Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU373343 |
| length | 227 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G315225 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 5610754 ~ 5610980 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU373331 | lncRNA | downstream | 45979 | 5564563 ~ 5564775 (-) | True | G315213 |
| TU373292 | lncRNA | downstream | 149163 | 5461387 ~ 5461591 (-) | True | G315175 |
| TU373289 | lncRNA | downstream | 161625 | 5448924 ~ 5449129 (-) | True | G315172 |
| TU373256 | lncRNA | downstream | 276875 | 5333669 ~ 5333879 (-) | True | G315142 |
| TU373255 | lncRNA | downstream | 278601 | 5331894 ~ 5332153 (-) | True | G315141 |
| TU373511 | lncRNA | upstream | 111970 | 5722950 ~ 5723322 (-) | True | G315381 |
| TU373526 | lncRNA | upstream | 289130 | 5900110 ~ 5900708 (-) | True | G315393 |
| TU373755 | lncRNA | upstream | 612375 | 6223355 ~ 6224613 (-) | True | G315595 |
| TU373778 | lncRNA | upstream | 652648 | 6263628 ~ 6264498 (-) | True | G315604 |
| TU373780 | lncRNA | upstream | 654949 | 6265929 ~ 6266300 (-) | True | G315606 |
| XM_026941094.2 | mRNA | downstream | 163581 | 5384557 ~ 5447173 (-) | False | schip1 |
| XM_026941096.2 | mRNA | downstream | 182384 | 5384557 ~ 5428370 (-) | False | schip1 |
| XM_026941097.2 | mRNA | downstream | 194046 | 5384557 ~ 5416708 (-) | False | schip1 |
| XM_026941095.2 | mRNA | downstream | 201645 | 5384557 ~ 5409109 (-) | False | schip1 |
| XM_026941014.2 | mRNA | downstream | 233784 | 5371068 ~ 5376970 (-) | True | il12a |
| XM_026941491.2 | mRNA | upstream | 82684 | 5693664 ~ 5709552 (-) | False | mfsd1 |
| XM_026941492.2 | mRNA | upstream | 85288 | 5696268 ~ 5709552 (-) | True | mfsd1 |
| XM_026941242.2 | mRNA | upstream | 105609 | 5716589 ~ 5730765 (-) | True | gfm1 |
| XM_034314895.1 | mRNA | upstream | 121773 | 5732753 ~ 5734846 (-) | True | LOC117599999 |
| XM_026940871.2 | mRNA | upstream | 134427 | 5745407 ~ 5756063 (-) | False | mlf1 |
| trnat-agu_16 | other | downstream | 388919 | 5221762 ~ 5221835 (-) | True | trnat-agu_16 |
| trnat-agu_15 | other | downstream | 389738 | 5220943 ~ 5221016 (-) | True | trnat-agu_15 |
| trnat-agu_14 | other | downstream | 390220 | 5220461 ~ 5220534 (-) | True | trnat-agu_14 |
| trnas-aga_15 | other | downstream | 1984307 | 3626366 ~ 3626447 (-) | True | trnas-aga_15 |
| TU371730 | other | downstream | 2295662 | 3313304 ~ 3315092 (-) | True | G313817 |
| XR_003404409.1 | other | upstream | 716688 | 6327668 ~ 6327776 (-) | True | LOC113543401 |
| XR_003404412.1 | other | upstream | 859355 | 6470335 ~ 6470426 (-) | True | LOC113543404 |
| XR_004576924.1 | other | upstream | 2230922 | 7841902 ~ 7842020 (-) | True | LOC117595747 |
| XR_004576920.1 | other | upstream | 2233010 | 7843990 ~ 7844108 (-) | True | LOC117595743 |
| XR_004576926.1 | other | upstream | 2235072 | 7846052 ~ 7846170 (-) | True | LOC117595749 |
