Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU375144 |
| length | 1108 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G316754 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 8332424 ~ 8333531 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU375142 | lncRNA | upstream | 638 | 8331506 ~ 8331786 (+) | True | G316752 |
| XR_004580332.1 | lncRNA | upstream | 70712 | 8260724 ~ 8261712 (+) | False | LOC113543009 |
| TU375128 | lncRNA | upstream | 70716 | 8259258 ~ 8261708 (+) | False | LOC113543009 |
| TU375132 | lncRNA | upstream | 70716 | 8259258 ~ 8261708 (+) | True | LOC113543009 |
| TU375127 | lncRNA | upstream | 70793 | 8259258 ~ 8261631 (+) | False | LOC113543009 |
| TU375146 | lncRNA | downstream | 43254 | 8376785 ~ 8377093 (+) | True | G316756 |
| TU375442 | lncRNA | downstream | 254464 | 8587995 ~ 8588211 (+) | True | G317008 |
| TU375461 | lncRNA | downstream | 327755 | 8661286 ~ 8661776 (+) | True | G317027 |
| TU375465 | lncRNA | downstream | 355904 | 8689435 ~ 8691471 (+) | True | G317031 |
| TU375493 | lncRNA | downstream | 392810 | 8726341 ~ 8730818 (+) | True | G317045 |
| XM_034314850.1 | mRNA | upstream | 4915 | 8275578 ~ 8327509 (+) | True | dip2cb |
| XM_026941173.2 | mRNA | upstream | 74763 | 8193755 ~ 8257661 (+) | True | myo10 |
| XM_026941417.2 | mRNA | upstream | 201942 | 8070565 ~ 8130482 (+) | True | adcy8 |
| XM_026941416.2 | mRNA | upstream | 201942 | 8071432 ~ 8130482 (+) | False | adcy8 |
| XM_034314657.1 | mRNA | upstream | 358428 | 7957043 ~ 7973996 (+) | True | oc90 |
| XM_026941045.2 | mRNA | downstream | 1293 | 8334824 ~ 8379466 (+) | True | esyt2a |
| XM_026941046.2 | mRNA | downstream | 1296 | 8334827 ~ 8379466 (+) | False | esyt2a |
| XM_034314688.1 | mRNA | downstream | 1297 | 8334828 ~ 8379466 (+) | False | esyt2a |
| XM_026941385.2 | mRNA | downstream | 52981 | 8386512 ~ 8422245 (+) | False | slco5a1b |
| XM_026941384.2 | mRNA | downstream | 52982 | 8386513 ~ 8422245 (+) | True | slco5a1b |
| TU375135 | other | upstream | 63226 | 8268709 ~ 8269198 (+) | True | G316745 |
| TU375134 | other | upstream | 68363 | 8263339 ~ 8264061 (+) | True | G316744 |
| TU374748 | other | upstream | 636505 | 7695534 ~ 7695919 (+) | True | G316413 |
| TU374286 | other | upstream | 1196923 | 7133459 ~ 7135501 (+) | True | G316001 |
| XR_004580329.1 | other | upstream | 1387816 | 6937340 ~ 6944608 (+) | False | LOC113543138 |
| TU375607 | other | downstream | 478426 | 8811957 ~ 8812820 (+) | False | LOC117599964 |
| TU375892 | other | downstream | 1078792 | 9412323 ~ 9415164 (+) | True | G317390 |
| TU376185 | other | downstream | 1625798 | 9959329 ~ 9977901 (+) | False | pip4p1a |
| trnar-ucu_12 | other | downstream | 1854220 | 10187751 ~ 10187824 (+) | True | trnar-ucu_12 |
| XR_004580322.1 | other | downstream | 2202900 | 10536431 ~ 10562994 (+) | False | capn10 |
