RNA id: TU97181



Basic Information


Item Value
RNA id TU97181
length 203
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G77878
representative True

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 14407618 ~ 14407820 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTTCAAGTGGTGCGGGTTTAAGTGCCTCCATTGGATTTCACTATCCTGGCAAAACATACTGTTGACGGATTATTACTGGATGCAAAAGCCACTTAACACAGATGTGTGTGTCCTGGGAAGAGAGCGGTGTTAGTATGAGTGCAGCACAGCCCCGCAGCATCCACAGCCCGGCCcagacctctctctccctctccctctctctc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU97148 lncRNA downstream 236036 14171311 ~ 14171582 (-) True G77852
TU97071 lncRNA downstream 1058426 13347541 ~ 13349192 (-) False AMCG00010082
TU97036 lncRNA downstream 1686009 12718883 ~ 12721609 (-) True G77760
TU97034 lncRNA downstream 1863978 12543435 ~ 12543640 (-) True G77758
TU97031 lncRNA downstream 1893697 12462963 ~ 12513921 (-) True G77755
TU97190 lncRNA upstream 33796 14441616 ~ 14442261 (-) False G77887
TU97191 lncRNA upstream 37531 14445351 ~ 14446141 (-) True G77887
TU97208 lncRNA upstream 97618 14505438 ~ 14511946 (-) True G77896
TU97207 lncRNA upstream 106108 14513928 ~ 14519622 (-) True G77895
TU97301 lncRNA upstream 551240 14959060 ~ 14961505 (-) True G77975
AMCG00010092 mRNA downstream 127691 14260739 ~ 14279927 (-) True AMCG00010092
AMCG00010090 mRNA downstream 695247 13703397 ~ 13712371 (-) True AMCG00010090
AMCG00010091 mRNA downstream 731952 13643088 ~ 13675666 (-) True AMCG00010091
AMCG00010088 mRNA downstream 772218 13578716 ~ 13635400 (-) True AMCG00010088
AMCG00010082 mRNA downstream 937363 13347713 ~ 13470255 (-) True AMCG00010082
AMCG00010097 mRNA upstream 132083 14539903 ~ 14546114 (-) True AMCG00010097
AMCG00010100 mRNA upstream 401186 14809006 ~ 14829310 (-) True AMCG00010100
AMCG00010104 mRNA upstream 480644 14888464 ~ 14896353 (-) True AMCG00010104
AMCG00010103 mRNA upstream 518188 14926008 ~ 14927943 (-) True AMCG00010103
AMCG00010105 mRNA upstream 535734 14943554 ~ 14948207 (-) True AMCG00010105
TU96773 other downstream 2678453 11728503 ~ 11729165 (-) True G77544
TU95829 other downstream 7344797 7057805 ~ 7062821 (-) True G76762
TU95819 other downstream 7470550 6936718 ~ 6937068 (-) True G76752
TU95738 other downstream 7738784 6666606 ~ 6668834 (-) False G76684
TU95471 other downstream 8506634 5894675 ~ 5900984 (-) True G76463
TU98065 other upstream 3433172 17840992 ~ 17844389 (-) False AMCG00010188
TU98067 other upstream 3445047 17852867 ~ 17855730 (-) False AMCG00010190
TU98072 other upstream 3537415 17945235 ~ 17945761 (-) True G78610
TU98705 other upstream 6523351 20931171 ~ 20941393 (-) True G79147
TU98765 other upstream 6668121 21075941 ~ 21081825 (-) False AMCG00010247

Expression Profile