RNA id: TCONS_00002319


Basic Information

Item Value
RNA id TCONS_00002319
length 116
RNA type rRNA
GC content 0.47
exon number 1
gene id XLOC_001415
representative True

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 42974760 ~ 42974875 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TACCCTAACCATATCACATTGTAGCCCAAGACCAGTTAttaactgaagctaagcaggggtgagcctggtcagtacctggatgggagaccacatggaaaaacctgtggtctgtgtaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000175960

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00003461 lncRNA downstream 684899 42286521 ~ 42289861 (-) False XLOC_001413
TCONS_00002316 lncRNA downstream 685016 42288236 ~ 42289744 (-) True XLOC_001413
TCONS_00003460 lncRNA downstream 1097983 41874937 ~ 41876777 (-) True XLOC_001410
TCONS_00002312 lncRNA downstream 1156979 41793301 ~ 41817781 (-) True XLOC_001409
TCONS_00003459 lncRNA downstream 1213598 41757056 ~ 41761162 (-) True XLOC_001408
TCONS_00002971 lncRNA upstream 156015 43130890 ~ 43155453 (-) True XLOC_001416
TCONS_00003462 lncRNA upstream 543334 43518209 ~ 43540087 (-) False XLOC_001417
TCONS_00003463 lncRNA upstream 543334 43518209 ~ 43617169 (-) False XLOC_001417
TCONS_00002972 lncRNA upstream 543480 43518355 ~ 43615138 (-) True XLOC_001417
TCONS_00002321 lncRNA upstream 697794 43672669 ~ 43684583 (-) True XLOC_001418
TCONS_00002317 mRNA downstream 195685 42776553 ~ 42779075 (-) False XLOC_001414
TCONS_00002318 mRNA downstream 196250 42776942 ~ 42778510 (-) True XLOC_001414
TCONS_00002315 mRNA downstream 685056 42281308 ~ 42289704 (-) False XLOC_001413
TCONS_00002313 mRNA downstream 992178 41957210 ~ 41982582 (-) True XLOC_001411
TCONS_00002310 mRNA downstream 1156976 41770842 ~ 41817784 (-) False XLOC_001409
TCONS_00002320 mRNA upstream 677605 43652480 ~ 43684584 (-) False XLOC_001418
TCONS_00002322 mRNA upstream 720158 43695033 ~ 43712120 (-) False XLOC_001419
TCONS_00002323 mRNA upstream 736884 43711759 ~ 43727613 (-) False XLOC_001419
TCONS_00002324 mRNA upstream 739274 43714149 ~ 43727555 (-) False XLOC_001419
TCONS_00002325 mRNA upstream 739344 43714219 ~ 43727576 (-) False XLOC_001419
TCONS_00002314 other downstream 697110 42277523 ~ 42277650 (-) True XLOC_001412
TCONS_00002309 other downstream 1373608 41601035 ~ 41601152 (-) True XLOC_001407
TCONS_00002308 other downstream 1662868 41311777 ~ 41311892 (-) True XLOC_001402
TCONS_00002306 other downstream 1714482 41230815 ~ 41260278 (-) True XLOC_001400
TCONS_00002305 other downstream 1735176 41223078 ~ 41239584 (-) False XLOC_001400
TCONS_00002327 other upstream 745074 43719949 ~ 43725218 (-) False XLOC_001419
TCONS_00002392 other upstream 2341334 45316209 ~ 45317628 (-) True XLOC_001459
TCONS_00002410 other upstream 2680200 45655075 ~ 45662751 (-) True XLOC_001465
TCONS_00002426 other upstream 3652614 46627489 ~ 46630704 (-) True XLOC_001475
TCONS_00002434 other upstream 3747504 46722379 ~ 46722518 (-) False XLOC_001480