Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00021264 |
| length | 1308 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 7 |
| gene id | AMCG00021264 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 13402634 ~ 13407007 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0009311 | oligosaccharide metabolic process | biological_process |
| GO:0016139 | glycoside catabolic process | biological_process |
| GO:0046477 | glycosylceramide catabolic process | biological_process |
| GO:0005764 | lysosome | cellular_component |
| GO:0005794 | Golgi apparatus | cellular_component |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005102 | signaling receptor binding | molecular_function |
| GO:0004557 | alpha-galactosidase activity | molecular_function |
| GO:0042803 | protein homodimerization activity | molecular_function |
| id | description |
|---|---|
| K01189 | GLA; alpha-galactosidase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU105833 | lncRNA | upstream | 340871 | 13056182 ~ 13061763 (+) | True | G84837 |
| TU105821 | lncRNA | upstream | 563425 | 12800829 ~ 12839209 (+) | True | G84825 |
| TU105794 | lncRNA | upstream | 1064427 | 12337997 ~ 12338207 (+) | True | G84803 |
| TU105792 | lncRNA | upstream | 1065495 | 12336802 ~ 12337139 (+) | True | G84801 |
| TU105738 | lncRNA | upstream | 1301291 | 12101131 ~ 12101343 (+) | True | G84759 |
| TU105892 | lncRNA | downstream | 28300 | 13435307 ~ 13437408 (+) | True | AMCG00021267 |
| TU105947 | lncRNA | downstream | 164764 | 13571771 ~ 13572447 (+) | True | G84923 |
| TU105969 | lncRNA | downstream | 193198 | 13600205 ~ 13601928 (+) | True | G84936 |
| TU105971 | lncRNA | downstream | 196851 | 13603858 ~ 13604159 (+) | True | G84938 |
| TU106002 | lncRNA | downstream | 273930 | 13680937 ~ 13685245 (+) | True | G84962 |
| AMCG00021262 | mRNA | upstream | 25199 | 13358258 ~ 13377435 (+) | True | AMCG00021262 |
| AMCG00021256 | mRNA | upstream | 952876 | 12442215 ~ 12449758 (+) | True | AMCG00021256 |
| AMCG00021255 | mRNA | upstream | 1206854 | 12186009 ~ 12195780 (+) | True | AMCG00021255 |
| AMCG00021248 | mRNA | upstream | 1259168 | 12131195 ~ 12143466 (+) | True | AMCG00021248 |
| AMCG00021254 | mRNA | upstream | 1295127 | 12106314 ~ 12107507 (+) | True | AMCG00021254 |
| AMCG00021265 | mRNA | downstream | 12805 | 13419812 ~ 13433529 (+) | True | AMCG00021265 |
| AMCG00021267 | mRNA | downstream | 28452 | 13435459 ~ 13436383 (+) | False | AMCG00021267 |
| AMCG00021263 | mRNA | downstream | 35778 | 13442785 ~ 13447518 (+) | True | AMCG00021263 |
| AMCG00021266 | mRNA | downstream | 41589 | 13448596 ~ 13454852 (+) | True | AMCG00021266 |
| AMCG00021277 | mRNA | downstream | 179887 | 13586894 ~ 13599015 (+) | True | AMCG00021277 |
| TU105723 | other | upstream | 1301927 | 12075345 ~ 12100707 (+) | True | G84749 |
| TU105614 | other | upstream | 2415460 | 10963148 ~ 10987174 (+) | True | G84657 |
| TU105325 | other | upstream | 3979215 | 9416267 ~ 9423419 (+) | True | G84425 |
| TU105166 | other | upstream | 4769224 | 8631727 ~ 8633410 (+) | True | G84301 |
| TU104814 | other | upstream | 6281397 | 7115381 ~ 7121237 (+) | False | AMCG00021150 |
| TU106850 | other | downstream | 2656593 | 16063600 ~ 16073618 (+) | False | AMCG00021373 |
| TU107049 | other | downstream | 3183174 | 16590181 ~ 16592973 (+) | True | G85764 |
| TU107079 | other | downstream | 3249637 | 16656644 ~ 16661882 (+) | True | G85787 |
| TU107080 | other | downstream | 3249637 | 16656644 ~ 16714038 (+) | False | G85787 |
| TU107177 | other | downstream | 3590870 | 16997877 ~ 17004131 (+) | True | G85869 |
