Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00021306 |
| length | 1420 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 11 |
| gene id | AMCG00021306 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 14080550 ~ 14105940 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| K16939 | SEPT6_8_11; septin 6/8/11 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU106172 | lncRNA | upstream | 7425 | 14069385 ~ 14073125 (+) | True | AMCG00021292 |
| TU106162 | lncRNA | upstream | 44888 | 14034215 ~ 14035662 (+) | True | G85090 |
| TU106156 | lncRNA | upstream | 61609 | 14016133 ~ 14018941 (+) | False | AMCG00021296 |
| TU106138 | lncRNA | upstream | 78131 | 14000596 ~ 14002419 (+) | True | G85069 |
| TU106122 | lncRNA | upstream | 116326 | 13963109 ~ 13964224 (+) | True | G85056 |
| TU106180 | lncRNA | downstream | 3587 | 14109527 ~ 14152543 (+) | True | G85098 |
| TU106304 | lncRNA | downstream | 266780 | 14372720 ~ 14373557 (+) | True | G85185 |
| TU106330 | lncRNA | downstream | 350688 | 14456628 ~ 14495849 (+) | True | G85202 |
| TU106507 | lncRNA | downstream | 1020827 | 15126767 ~ 15127233 (+) | True | G85344 |
| TU106508 | lncRNA | downstream | 1021349 | 15127289 ~ 15127965 (+) | True | G85345 |
| AMCG00021292 | mRNA | upstream | 7576 | 14069330 ~ 14072974 (+) | False | AMCG00021292 |
| AMCG00021295 | mRNA | upstream | 12158 | 14063972 ~ 14068392 (+) | True | AMCG00021295 |
| AMCG00021293 | mRNA | upstream | 24569 | 14053219 ~ 14055981 (+) | True | AMCG00021293 |
| AMCG00021294 | mRNA | upstream | 32749 | 14041440 ~ 14047801 (+) | True | AMCG00021294 |
| AMCG00021296 | mRNA | upstream | 46993 | 14016133 ~ 14033557 (+) | True | AMCG00021296 |
| AMCG00021305 | mRNA | downstream | 4518 | 14110458 ~ 14117266 (+) | True | AMCG00021305 |
| AMCG00021312 | mRNA | downstream | 73238 | 14179178 ~ 14197672 (+) | True | AMCG00021312 |
| AMCG00021317 | mRNA | downstream | 215945 | 14321885 ~ 14339956 (+) | True | AMCG00021317 |
| AMCG00021322 | mRNA | downstream | 384193 | 14490133 ~ 14493431 (+) | True | AMCG00021322 |
| AMCG00021323 | mRNA | downstream | 426842 | 14532782 ~ 14552790 (+) | True | AMCG00021323 |
| TU105723 | other | upstream | 1979843 | 12075345 ~ 12100707 (+) | True | G84749 |
| TU105614 | other | upstream | 3093376 | 10963148 ~ 10987174 (+) | True | G84657 |
| TU105325 | other | upstream | 4657131 | 9416267 ~ 9423419 (+) | True | G84425 |
| TU105166 | other | upstream | 5447140 | 8631727 ~ 8633410 (+) | True | G84301 |
| TU104814 | other | upstream | 6959313 | 7115381 ~ 7121237 (+) | False | AMCG00021150 |
| TU106850 | other | downstream | 1957660 | 16063600 ~ 16073618 (+) | False | AMCG00021373 |
| TU107049 | other | downstream | 2484241 | 16590181 ~ 16592973 (+) | True | G85764 |
| TU107079 | other | downstream | 2550704 | 16656644 ~ 16661882 (+) | True | G85787 |
| TU107080 | other | downstream | 2550704 | 16656644 ~ 16714038 (+) | False | G85787 |
| TU107177 | other | downstream | 2891937 | 16997877 ~ 17004131 (+) | True | G85869 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00015618 | False | 2779 | mRNA | 0.42 | 11 | NC_007125.7 | 33297781 ~ 33328031 (-) |
| grasscarp (Ctenopharyngodon idella) | TU7996 | True | 1461 | lncRNA | 0.48 | 12 | CI01000000 | 11733931 ~ 11891806 (+) |
| tiger barb (Puntius tetrazona) | TU7996 | True | 1124 | lncRNA | 0.39 | 2 | NC_056699.1 | 23489116 ~ 23491559 (+) |
