Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00021405 |
| length | 576 |
| RNA type | mRNA |
| GC content | 0.60 |
| exon number | 4 |
| gene id | AMCG00021405 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 16518570 ~ 16520363 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0001757 | somite specification | biological_process |
| GO:0045892 | negative regulation of transcription, DNA-templated | biological_process |
| GO:0032525 | somite rostral/caudal axis specification | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005515 | protein binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU106936 | lncRNA | upstream | 226377 | 16289749 ~ 16292193 (+) | True | G85674 |
| TU106874 | lncRNA | upstream | 348684 | 16140523 ~ 16169886 (+) | True | G85623 |
| TU106784 | lncRNA | upstream | 595849 | 15920739 ~ 15922721 (+) | True | G85552 |
| TU106723 | lncRNA | upstream | 763138 | 15753082 ~ 15755432 (+) | True | G85507 |
| TU106713 | lncRNA | upstream | 942052 | 15575549 ~ 15576518 (+) | True | G85497 |
| TU107030 | lncRNA | downstream | 27294 | 16547657 ~ 16549345 (+) | True | G85746 |
| TU107041 | lncRNA | downstream | 49084 | 16569447 ~ 16569650 (+) | True | G85757 |
| TU107042 | lncRNA | downstream | 51830 | 16572193 ~ 16572868 (+) | True | G85758 |
| TU107044 | lncRNA | downstream | 63954 | 16584317 ~ 16584765 (+) | True | G85760 |
| TU107047 | lncRNA | downstream | 65954 | 16586317 ~ 16589411 (+) | True | G85763 |
| AMCG00021397 | mRNA | upstream | 18925 | 16474783 ~ 16499645 (+) | True | AMCG00021397 |
| AMCG00021394 | mRNA | upstream | 46714 | 16466707 ~ 16471856 (+) | True | AMCG00021394 |
| AMCG00021395 | mRNA | upstream | 84494 | 16418223 ~ 16434076 (+) | True | AMCG00021395 |
| AMCG00021389 | mRNA | upstream | 228962 | 16288754 ~ 16289608 (+) | True | AMCG00021389 |
| AMCG00021386 | mRNA | upstream | 247698 | 16256465 ~ 16270872 (+) | True | AMCG00021386 |
| AMCG00021398 | mRNA | downstream | 5700 | 16526063 ~ 16527195 (+) | True | AMCG00021398 |
| AMCG00021402 | mRNA | downstream | 11585 | 16531948 ~ 16535816 (+) | True | AMCG00021402 |
| AMCG00021400 | mRNA | downstream | 21594 | 16541957 ~ 16545499 (+) | True | AMCG00021400 |
| AMCG00021399 | mRNA | downstream | 29670 | 16550033 ~ 16555645 (+) | True | AMCG00021399 |
| AMCG00021401 | mRNA | downstream | 36235 | 16556598 ~ 16561776 (+) | True | AMCG00021401 |
| TU106850 | other | upstream | 444952 | 16063600 ~ 16073618 (+) | False | AMCG00021373 |
| TU105723 | other | upstream | 4417863 | 12075345 ~ 12100707 (+) | True | G84749 |
| TU105614 | other | upstream | 5531396 | 10963148 ~ 10987174 (+) | True | G84657 |
| TU105325 | other | upstream | 7095151 | 9416267 ~ 9423419 (+) | True | G84425 |
| TU105166 | other | upstream | 7885160 | 8631727 ~ 8633410 (+) | True | G84301 |
| TU107049 | other | downstream | 69818 | 16590181 ~ 16592973 (+) | True | G85764 |
| TU107079 | other | downstream | 136281 | 16656644 ~ 16661882 (+) | True | G85787 |
| TU107080 | other | downstream | 136281 | 16656644 ~ 16714038 (+) | False | G85787 |
| TU107177 | other | downstream | 477514 | 16997877 ~ 17004131 (+) | True | G85869 |
| TU107506 | other | downstream | 1728127 | 18248490 ~ 18249686 (+) | True | G86121 |
