Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
sstr5 | 3: 11101585 ~ 11122914 (+) | protein_coding | GRCz11 | Danio rerio |
Dataset ID | Tissue / Organ | Experiment type | Sample | Cell type | Marker class | Evidence | |
---|---|---|---|---|---|---|---|
GSE168695 (5dpf) | embryo | baseline | 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos |
KS ionocytes (cluster: 15) HR ionocytes (cluster: 5) |
potential marker potential marker |
NA NA |
|
PRJNA564810 (1dpf) | embryo | baseline | 1dpf, a single-cell transcriptome atlas for zebrafish development |
Integument Ionocyte (cluster: 27) |
potential marker |
NA |
|
PRJNA605021 (supporting cells) | neuromast | baseline | 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae | NA | NA | NA | |
PRJNA668529 (3h) | olfactory rosette | disease | 3mpf, intranasal 100ng r-Spike 3 hours | NA | NA | NA | |
PRJNA668529 (control) | olfactory rosette | baseline | 3mpf, intranasal PBS | NA | NA | NA | |
GSE148591 (3mpf) | pituitary | transplant | 3mpf, graft transplantation during early embryogenesis |
Prop1+ group (cluster: 11) |
potential marker |
NA |
|
PRJNA554650 (6.5dpf) | brain | baseline | 6.5dpf, whole brain of nr1d1:VNP fish | NA | NA | NA | |
PRJNA415636 (brain) | brain | baseline | adult, Zebrabow M, brain | NA | NA | NA | |
GSE158142 (5dpf) | brain, eye | baseline | 5dpf, untreatment | NA | NA | NA | |
GSE158142 (8dpf) | brain, eye | baseline | 8dpf, untreatment | NA | NA | NA | |
GSE158142 (15dpf) | brain, eye | baseline | 15dpf, untreatment | NA | NA | NA | |
PRJNA610520 (3.5dpf) | caudal hematopoietic tissue | baseline | 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. | NA | NA | NA | |
PRJNA610520 (4.5dpf) | caudal hematopoietic tissue | baseline | 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. | NA | NA | NA | |
GSE144944 (fgfr3 -|-) | cranial vault | growth | 1mpf, fgfr3 -/- | NA | NA | NA | |
PRJNA564810 (2dpf) | embryo | baseline | 2dpf, a single-cell transcriptome atlas for zebrafish development | NA | NA | NA | |
PRJNA640816 (2.9dpf) | embryo | baseline | 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells | NA | NA | NA | |
GSE173972 (WT, ezh1+|+) | embryo | baseline | 1.25dpf, Kdrl-positive embryos | NA | NA | NA | |
GSE106587 (WT) | embryo | baseline | 12hpf, 6 somites, wild-type TLAB embryo | NA | NA | NA | |
GSE173972 (HET, ezh1+|-) | embryo | hematopoietic | 1.25dpf, Kdrl-positive embryos | NA | NA | NA | |
GSE126647 (control) | embryo | baseline | 1.17dpf, control nkx2.5:ZsYellow+ cells | NA | NA | NA | |
PRJNA564810 (5dpf) | embryo | baseline | 5dpf, a single-cell transcriptome atlas for zebrafish development | NA | NA | NA | |
GSE173972 (KO, ezh1-|-) | embryo | hematopoietic | 1.25dpf, Kdrl-positive embryos | NA | NA | NA | |
GSE126647 (Pbx4-depleted) | embryo | growth | 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells | NA | NA | NA | |
GSE158142 (1.5dpf) | head | baseline | 1.5dpf, untreatment | NA | NA | NA | |
GSE158142 (18hpf) | head | baseline | 18hpf, 18 somites, untreatment | NA | NA | NA | |
GSE158142 (12hpf) | head | baseline | 12hpf, 6 somites, untreatment | NA | NA | NA | |
GSE158142 (2dpf) | head | baseline | 2dpf, untreatment | NA | NA | NA | |
GSE158142 (20hpf) | head | baseline | 20hpf, 21-22 somites, untreatment | NA | NA | NA | |
GSE158142 (14hpf) | head | baseline | 14hpf, 10 somites, untreatment | NA | NA | NA | |
GSE158142 (3dpf) | head | baseline | 3dpf, untreatment | NA | NA | NA | |
GSE158142 (24hpf) | head | baseline | 24hpf, untreatment | NA | NA | NA | |
GSE158142 (16hpf) | head | baseline | 16hpf, 14 somites, untreatment | NA | NA | NA | |
PRJNA608912 (wt_unjuried) | heart | baseline | 5mpf, wild type, uninjured | NA | NA | NA | |
PRJNA608912 (wt_2dpi) | heart | regeneration | 5mpf, wild type, 2 days post injury | NA | NA | NA | |
PRJNA608912 (wt_7dpi) | heart | regeneration | 5mpf, wild type, 7 days post injury | NA | NA | NA | |
PRJNA754013 (zebrafish) | hypothalamus | baseline | adult, male, female, untreatment | NA | NA | NA | |
GSE150498 (nod2-|-, untreated) | intestine | disease | 6dpf, nod2-/-, untreated | NA | NA | NA | |
GSE150498 (wildtype, 2X DSS+BZA) | intestine | disease | 6dpf, wildtype, 2X DSS+BZA | NA | NA | NA | |
GSE150498 (untreated ctrl) | intestine | baseline | 6dpf, untreated ctrl | NA | NA | NA | |
GSE150498 (wildtype, 1X DSS) | intestine | disease | 6dpf, wildtype, 1X DSS | NA | NA | NA | |
GSE150498 (DSS treated) | intestine | disease | 6dpf, DSS treated | NA | NA | NA | |
GSE150498 (nod2-|-, 2X DSS) | intestine | disease | 6dpf, nod2-/-, 2X DSS | NA | NA | NA | |
GSE150498 (nod2-|-, 1X DSS) | intestine | disease | 6dpf, nod2-/-, 1X DSS | NA | NA | NA | |
GSE150498 (wildtype, untreated) | intestine | baseline | 6dpf, wildtype, untreated | NA | NA | NA | |
GSE150498 (nod2-|-, 2X DSS+BZA) | intestine | disease | 6dpf, nod2-/-, 2X DSS+BZA | NA | NA | NA | |
GSE150498 (wildtype, 2X DSS) | intestine | disease | 6dpf, wildtype, 2X DSS | NA | NA | NA | |
GSE123241 (wild type) | neuromast | baseline | 5dpf, wild type during sensory hair cell regeneration, lateral line sensory | NA | NA | NA | |
PRJNA605021 (hair cells) | neuromast | baseline | 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae | NA | NA | NA | |
PRJNA668529 (3d) | olfactory rosette | disease | 3mpf, intranasal 100ng r-Spike 3 days | NA | NA | NA | |
GSE148591 (6mpf) | pituitary | baseline | 6mpf, male, Sox17:CreERT2 | NA | NA | NA | |
GSE122680 (14dpf) | retina | baseline | 14dpf, WT, untreatment | NA | NA | NA | |
PRJNA551501 (2mpf) | thyroid gland | baseline | 2mpf, Tg(tg:mVenus-T2A-NTR) | NA | NA | NA | |
PRJNA551501 (8mpf) | thyroid gland | baseline | 8mpf, Tg(tg:mVenus-T2A-NTR) | NA | NA | NA | |
GSE152982 (wild type) | trunk | baseline | 1.25dpf, untreatment | NA | NA | NA | |
GSE131136 (all) | trunk, skin | baseline | 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone | NA | NA | NA | |
GSE158099 (WT) | whole body | baseline | 2.5dpf, cd41:GFPlow-WT | NA | NA | NA | |
GSE158099 (WT) | whole body | baseline | 16dpf, cd41:GFPlow-WT | NA | NA | NA | |
GSE176129 (pdgfrb-positive) | whole body | baseline | 5dpf, FACS-isolated pdgfrb-positive cells | NA | NA | NA | |
GSE158099 (runx1 -|-) | whole body | hematopoietic | 16dpf, cd41:GFPlow-runx1-/- | NA | NA | NA | |
GSE158099 (runx1 -|-) | whole body | hematopoietic | 2.5dpf, cd41:GFPlow-runx1-/- | NA | NA | NA | |
GSE158099 (runx1 -|-) | whole body | hematopoietic | 16dpf, cd41:GFPlow-runx1-/- | NA | NA | NA | |
GSE158099 (runx1 -|-) | whole body | hematopoietic | 6dpf, cd41:GFPlow-runx1-/- | NA | NA | NA |