GENE ID: ENSDARG00000115405

Symbol Location Gene type Genome version Species
hbbe1.2 3: 55122662 ~ 55123439 (+) protein_coding GRCz11 Danio rerio

MARKER



EXPRESSION

Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment Erythroid cells (cluster: 8)
 marker
 DOI:10.1016/j.neuron.2020.09.023
GSE158142 (3dpf) head baseline 3dpf, untreatment Erythroid cells (cluster: 12)
 marker
 DOI:10.1016/j.neuron.2020.09.023
GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment Erythroid cells (cluster: 11)
 potential marker
 NA
GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment Erythroid cells (cluster: 10)
 potential marker
 NA
PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Erythroid cells (cluster: 4)
 potential marker
 NA
PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Erythroid cells (cluster: 12)
Erythroid cells (cluster: 3)
 potential marker
potential marker
 NA
NA
GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Erythroid cells (cluster: 1)
 potential marker
 NA
GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Erythroid cells (cluster: 1)
Erythroid cells (cluster: 2)
 potential marker
potential marker
 NA
NA
GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Erythroid cells (cluster: 1)
 potential marker
 NA
GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells Endothelium (cluster: 5)
 potential marker
 NA
PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Hematopoietic cells (cluster: 8)
 potential marker
 NA
PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Erythroid cells (cluster: 28)
Hematopoietic cells (cluster: 9)
 potential marker
potential marker
 NA
NA
PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Hematopoietic cells (cluster: 21)
 potential marker
 NA
GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment Erythroid cells (cluster: 15)
 potential marker
 NA
GSE158142 (2dpf) head baseline 2dpf, untreatment Erythroid cells (cluster: 13)
 potential marker
 NA
GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl Enteric neuron (cluster: 13)
 potential marker
 NA
GSE150498 (DSS treated) intestine disease 6dpf, DSS treated
GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS
GSE123241 (wild type) neuromast baseline 5dpf, wild type during sensory hair cell regeneration, lateral line sensory
PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae HSPCs (cluster: 12)
 potential marker
 NA
GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment
GSE152982 (wild type) trunk baseline 1.25dpf, untreatment Red blood cells (cluster: 12)
 potential marker
 NA
GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Erythroid cells (cluster: 44)
 potential marker
 NA
GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- Erythroid cells (cluster: 3)
 potential marker
 NA
GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT Erythroid cells (cluster: 3)
 potential marker
 NA
GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT Erythroid cells (cluster: 8)
 potential marker
 NA
GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/- Erythroid cells (cluster: 4)
 potential marker
 NA
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- HSPCs (cluster: 2)
HSPCs (cluster: 5)
 potential marker
potential marker
 NA
NA
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- HSPCs (cluster: 1)
 potential marker
 NA
PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish
GSE151354 (wild type) cartilage baseline 21dpf, wild type
GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/-
PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo
PRJNA706197 (1.25dpf) embryo baseline 1.25dpf, FACS sorted sox10:nEOS cells
PRJNA706197 (14hpf) embryo baseline 14hpf, FACS sorted sox10:nEOS cells
PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA734348 (shield, control) embryo baseline 6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells
PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment
GSE158142 (24hpf) head baseline 24hpf, untreatment
GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment
GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment
GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment
PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury
GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS
GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA
GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated
GSE150498 (wildtype, 2X DSS+BZA) intestine disease 6dpf, wildtype, 2X DSS+BZA
GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS
GSE123241 (fgf3 mutants) neuromast regeneration 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
GSE123241 (fgf3 siblings) neuromast regeneration 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory
GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis
GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment
GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment
GSE163907 (24hpf) trunk baseline 24hpf, trunk tg(sox10:GFP) positive cells
GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells
PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases
GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT

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