Fish Single-cell RNA Database

GENE ID: ENSDARG00000013856

Symbol	Location	Gene type	Genome version	Species
amy2a	2: 15612755 ~ 15626972 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000013856 (amy2a), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000045835	si:dkey-14d8.6	4: 5531583 ~ 5533803 (+)
ENSDARG00000053709	si:ch73-89b15.3	4: 2267641 ~ 2290268 (+)
ENSDARG00000069160	tafa5a	4: 27251865 ~ 27398414 (-)
ENSDARG00000074547	si:ch211-240l19.8	4: 8029968 ~ 8030583 (-)
ENSDARG00000090428	ctrb1	7: 35075847 ~ 35079299 (+)
ENSDARG00000013317	pygmb	7: 22823889 ~ 22852189 (+)
ENSDARG00000024503	c6ast3	7: 38642114 ~ 38644560 (-)
ENSDARG00000007276	ela3l	5: 26111596 ~ 26118855 (-)
ENSDARG00000012539	dnase1	3: 27778975 ~ 27784457 (-)
ENSDARG00000090714	gaa	3: 18424244 ~ 18435575 (+)
ENSDARG00000013856	amy2a	2: 15612755 ~ 15626972 (+)
ENSDARG00000075007	chst2a	2: 8112449 ~ 8114608 (+)
ENSDARG00000103811	agla	2: 20472150 ~ 20526830 (+)
ENSDARG00000074282	si:ch73-12o23.1	1: 9499645 ~ 9527200 (-)
ENSDARG00000018263	pdia2	1: 9954489 ~ 9966195 (+)
ENSDARG00000042993	prss1	16: 25080764 ~ 25085327 (-)
ENSDARG00000056765	ela2l	8: 21366771 ~ 21372485 (-)
ENSDARG00000056744	ela2	8: 21376290 ~ 21381734 (+)
ENSDARG00000009443	zgc:92137	17: 42983983 ~ 42988356 (-)
ENSDARG00000002021	pygb	17: 21126495 ~ 21152173 (+)
ENSDARG00000074556	ganc	17: 45259259 ~ 45302962 (+)
ENSDARG00000030357	zgc:66313	17: 43863708 ~ 43888569 (+)
ENSDARG00000058492	si:dkey-30c15.17	18: 7363242 ~ 7374783 (+)
ENSDARG00000102234	si:ch211-71n6.4	18: 44886077 ~ 44908479 (-)
ENSDARG00000071306	gip	12: 20662426 ~ 20665865 (-)
ENSDARG00000068680	ctrl	15: 37820258 ~ 37829160 (-)
ENSDARG00000055518	pygma	21: 28445052 ~ 28472239 (+)
ENSDARG00000029822	cel.2	21: 11385031 ~ 11393979 (+)
ENSDARG00000017490	cel.1	21: 11401247 ~ 11411365 (+)
ENSDARG00000029051	gbe1a	10: 24048663 ~ 24298042 (+)
ENSDARG00000045442	cpb1	24: 4755391 ~ 4765740 (-)
ENSDARG00000017314	cela1.6	22: 7439186 ~ 7447391 (+)
ENSDARG00000043175	cela1.1	22: 7462997 ~ 7470338 (+)
ENSDARG00000043168	cela1.5	22: 7497319 ~ 7508894 (+)
ENSDARG00000030915	cpa1	25: 18448186 ~ 18454016 (-)
ENSDARG00000021339	cpa5	25: 18459924 ~ 18470695 (-)
ENSDARG00000043722	cpa4	25: 16582172 ~ 16589461 (-)
--	si	--

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	Pancreatic epsilon cells (cluster: 28)	potential marker	NA
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl	Pancreatic cells (cluster: 15)	potential marker	NA
GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated	Pancreatic cells (cluster: 6)	potential marker	NA
GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS	Pancreatic cells (cluster: 9)	potential marker	NA
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA	Pancreatic cells (cluster: 8)	potential marker	NA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	Pancreas exocrine cells (cluster: 8)	potential marker	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	Pancreas cells (cluster: 43)	potential marker	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish
GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
PRJNA656271 (24hpf)	embryo	baseline	24hpf, FACS-isolated EGFP+ cells
PRJNA640816 (2.9dpf)	embryo	baseline	2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
GSE173972 (WT, ezh1+\|+)	embryo	baseline	1.25dpf, Kdrl-positive embryos
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum
GSE158142 (14hpf)	head	baseline	14hpf, 10 somites, untreatment
GSE158142 (16hpf)	head	baseline	16hpf, 14 somites, untreatment
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment
GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment
GSE158142 (24hpf)	head	baseline	24hpf, untreatment
PRJNA608912 (wt_7dpi)	heart	regeneration	5mpf, wild type, 7 days post injury
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated
GSE150498 (wildtype, 2X DSS)	intestine	disease	6dpf, wildtype, 2X DSS
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated
GSE137784 (no HCC)	liver	baseline	6mpf, male, isolated from the CreLox zebrafish with HCC
GSE137784 (HCC, HepABC)	liver	disease	6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC
GSE123241 (fgf3 mutants)	neuromast	regeneration	5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
GSE123241 (fgf3 siblings)	neuromast	regeneration	5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih
GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment
GSE122680 (2dpf)	retina	baseline	2dpf, WT, untreatment
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)
GSE163907 (24hpf)	trunk	baseline	24hpf, trunk tg(sox10:GFP) positive cells
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

GENE ID: ENSDARG00000013856

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences