Fish Single-cell RNA Database

GENE ID: ENSDARG00000069383

Symbol	Location	Gene type	Genome version	Species
cnga4	9: 32930622 ~ 32946439 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000069383 (cnga4), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000076530	jac6	7: 8489333 ~ 8490886 (-)
ENSDARG00000032344	pde4a	3: 46628885 ~ 46754730 (+)
ENSDARG00000037921	gng13b	3: 35589212 ~ 35602233 (-)
ENSDARG00000014098	pkd2	1: 50538839 ~ 50557030 (+)
ENSDARG00000024740	gng13a	1: 9227081 ~ 9228007 (-)
ENSDARG00000069383	cnga4	9: 32930622 ~ 32946439 (+)
ENSDARG00000117118	taar12e	20: 46060635 ~ 46061650 (-)
ENSDARG00000069206	taar15	20: 46206998 ~ 46207984 (+)
ENSDARG00000017437	adcy3b	20: 46651916 ~ 46693942 (+)
ENSDARG00000061940	htr4	14: 25133764 ~ 25309360 (-)
ENSDARG00000068242	cngb1a	18: 45483282 ~ 45519748 (+)
ENSDARG00000041005	or102-1	15: 31462664 ~ 31464048 (+)
ENSDARG00000041030	or111-1	15: 31350122 ~ 31352129 (-)
ENSDARG00000086633	or111-3	15: 31364709 ~ 31366742 (-)
ENSDARG00000091791	or111-5	15: 31382015 ~ 31383588 (-)
ENSDARG00000025658	or111-2	15: 31331356 ~ 31364729 (-)
ENSDARG00000041024	or111-6	15: 31389403 ~ 31390985 (-)
ENSDARG00000091216	or111-10	15: 31412595 ~ 31413998 (-)
ENSDARG00000044556	pacs1a	21: 27513859 ~ 27555345 (+)
ENSDARG00000003344	trpc2b	21: 30746348 ~ 30765533 (+)
ENSDARG00000001906	si:dkey-247m21.3	21: 20229926 ~ 20308457 (+)
ENSDARG00000032380	ompb	21: 22188010 ~ 22189719 (-)
ENSDARG00000056591	gucy1b2	11: 29739348 ~ 29755142 (+)
ENSDARG00000091143	or106-10	10: 36277528 ~ 36279141 (+)
ENSDARG00000010603	kctd9b	10: 42542517 ~ 42555822 (+)
ENSDARG00000042107	cngb1b	25: 17508235 ~ 17552299 (-)
--	ano2	--
--	si:ch1073-186i23.1	--

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	Endothelium (cluster: 17)	potential marker	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	Epidermal cells (cluster: 15)	potential marker	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	Ionocyte progenitors (cluster: 6)	potential marker	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	Ciliated olfactory sensory neuron (cluster: 5)	potential marker	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	Ciliated olfactory sensory neuron (cluster: 1)	potential marker	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	Ciliated olfactory sensory neuron (cluster: 1)	potential marker	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
GSE158849 (labeled)	embryo	baseline	6hpf, WT, 4sUTP injected (labeled)
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)
PRJNA656271 (24hpf)	embryo	baseline	24hpf, FACS-isolated EGFP+ cells
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells
PRJNA706197 (18hpf)	embryo	baseline	18hpf, FACS sorted sox10:nEOS cells
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment
GSE158142 (20hpf)	head	baseline	20hpf, 21-22 somites, untreatment
GSE158142 (24hpf)	head	baseline	24hpf, untreatment
GSE158142 (1.5dpf)	head	baseline	1.5dpf, untreatment
GSE158142 (2dpf)	head	baseline	2dpf, untreatment
GSE158142 (3dpf)	head	baseline	3dpf, untreatment
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS
GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA
GSE123241 (wild type)	neuromast	baseline	5dpf, wild type during sensory hair cell regeneration, lateral line sensory
GSE123241 (fgf3 mutants)	neuromast	regeneration	5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

GENE ID: ENSDARG00000069383

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences