GENE ID: ENSDARG00000116259

Symbol Location Gene type Genome version Species
chia.6 23: 17939611 ~ 17948125 (+) protein_coding GRCz11 Danio rerio

MARKER



EXPRESSION

Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Myeloid cells (cluster: 6)
Myeloid cells (cluster: 8)
 potential marker
potential marker
 NA
NA
PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Myeloid cells (cluster: 4)
 potential marker
 NA
PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Hepatocytes (cluster: 20)
Leukocytes (cluster: 27)
 potential marker
potential marker
 NA
NA
GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Epithelialized macrophages (cluster: 12)
 potential marker
 NA
PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured Neutrophils (cluster: 13)
 potential marker
 NA
PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury
PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured Neutrophils (cluster: 9)
 potential marker
 NA
PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury Neutrophils (cluster: 15)
 potential marker
 NA
PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver Pancreas duct epithelial cells (cluster: 7)
 potential marker
 NA
GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl Hepatocytes (cluster: 9)
 potential marker
 NA
GSE150498 (DSS treated) intestine disease 6dpf, DSS treated Hepatocytes (cluster: 9)
 potential marker
 NA
GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC Hepatocytes (cluster: 1)
 potential marker
 NA
PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Macrophages (cluster: 10)
 potential marker
 NA
PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Macrophages (cluster: 10)
Myeloid cells (cluster: 15)
 potential marker
potential marker
 NA
NA
PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS Macrophages (cluster: 12)
 potential marker
 NA
PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet Pancreas duct epithelial cells (cluster: 7)
 potential marker
 NA
PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR) Immune cells (cluster: 10)
 potential marker
 NA
GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells
PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases Melanoma cells (cluster: 8)
 potential marker
 NA
PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases Melanoma cells (cluster: 8)
 potential marker
 NA
GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT Neutrophils (cluster: 9)
 potential marker
 NA
PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry
PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development
GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development
GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo
GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment
GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment
GSE158142 (3dpf) head baseline 3dpf, untreatment
GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment
PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury
PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury
PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury
PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury
PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood
GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS
GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS
GSE150498 (wildtype, untreated) intestine baseline 6dpf, wildtype, untreated
GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA
GSE150498 (wildtype, 2X DSS) intestine disease 6dpf, wildtype, 2X DSS
GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated
GSE150498 (wildtype, 2X DSS+BZA) intestine disease 6dpf, wildtype, 2X DSS+BZA
GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS
GSE137784 (HCC, CreLox) liver disease 6mpf, male, isolated from the zebrafish without HCC
PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
GSE123241 (fgf3 mutants) neuromast regeneration 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
GSE123241 (fgf3 siblings) neuromast regeneration 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory
PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR)
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-

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