CI01000304_15896045_15897082


Basic Information

Item Value
gene id CI01000304_15896045_15897082
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 15896045 ~ 15897843 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_15896045_15897082.mRNA
ATGGCGGAGGTCACACAGCGGATCGGGAGAGAAGCTTACAAGCTTTTAAAACCACAAAATCTCCCGCTTTTGGATAAAAACTGTAAAGCCGTCTCACAGGCAGCTTATGTTGCAGCTTTAACAAATTCAATACAGCTCTGTGAGATTCCTAATGGCCGTGTCAGAGCTGCTAAAGGACTGTGTGAAACGAGCCCGGCAGGTCTGGAGACTGCAAAAGGGAATGTAAATAGACTCTTTACCCGCTTCACGGCTGCTGATGGAGATGCACACAACTTGAAAGTGCCGTTGGACTGCCGTTCTGGAAATATTAGTAAATGGAATGACTGCCGTGGATTGACGTCTAAGGCATCTCCAGTGCACGTGCCGTCCTGGAAGAGCTTGTGTTGGGGAATACATGGAAAACTCCATAAAAAGACTCTCTATAGACTTGCAAATGCTCAGTTTATGTCTTTCACTAGAGCTTACAGTGGCACACAGAATAACGGCGGTCCAGCTGAGCCACTATACAAATCAAAGTCTGCATATTATGACATTTTGGGAGTGTCTCCATCAGCCACCCATGCACAAATCAAGACTGCTTACTATAAGCAGTCCTTCATATATCACCCAGACAAGAACGCAGGGAGCGAGGAGGCCACGTTCAGGTTCTCTCAGATCAGTGAGTCTTACCACGTCCTGGGTAATAAAGCTCTGAGGAGGAAATACGATCGAGGGATCCTGAGTCAAGCAGACCTGCTGGGATCCAGCAAACCCACTAGCAAAGAGAGTTCAGCATCAGGACAGCAGACCAGAGCCCGACACTCCCCCTCTGTTGGATCCGCCCAGCAGAAGATCTTCGACTTTGATACCTTCATCAGATCACACTATGGAGAACAGCTTCAGAGAGAGAAGCAGCTCCGGCAGCGTAGAGAAGAGATTCTCAGGAAGGAGAAGGAGAACTATGAGGATGTGAAACTGGGCAGGTTGAAGGAGTTCACTGTGGGGTTAATGCTGGCTATGGCAATCGCCATCTTACTTAGCCTAAAGTCTAGCAAGTGATTAAGATACAGGGATACTTGAAGCATATCTCTCATATTTTAACAACCAACACGCAAATATATGGTACTGATATTTCATTTTTACTTTTTTTTTTTTTTTTTTTTTCATATGGGCAGTTGCATCAACCCCCTTAAAGTTAATACATTGGCAAGATACCCATTAAAAATATAAATGTTTTTTTGCAAACAAACAAAATACCATTGTTACTACTACAAAAAAGCATATGTAGATTTCAGATGCAAAAGCCTCCAAGTGGCATCTGAAAATCTCTTCTAAAATGAGCATTTTTATCAAGCTCGTATATTTATGTTCAGTTATTTCATGCTAATGGCAATGAAAATGACCTATTAAATTGAAATTACTGAACATAAACATACGAGCTTGATAAAAATGCTAATTTTAAAAGATTTTCAGATGGCTTTTGCCTCTAAAGTCTTCATATCTAGATATGATAATGATATATTTTCCCCAATGTTATTGTACTTAAAATAACCATGGTGTTTTGGTGGATAAGACAATTAAAAATGGTTTCTGTGTAATAATGGGTGCCATTTTAGCTATAATTGTGCTCTACCTCATCTGTTAAACTGTATTCAAAATGTAAGGATTAAATGAACCTTGAAACTGCTAGTAAACACTTACAGCATTATTTTGCACAAAGGCCCTTGGTAAAAACTGACCTGGGTTTATTAATGTCTGGCTTCACTTCACCTGAGCTACTTATTTAAATTTTAAGATAAATGACAACTATTGTGTTCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_15896045_15897082.mRNA True 1799 mRNA 0.40 1 15896045 15897843

Neighbor

gene id symbol gene type direction distance location
CI01000304_15817532_15846675 PPM1E coding upstream 49153 15814649 ~ 15846892 (+)
CI01000304_15785399_15786785 RAD51C coding upstream 109017 15785399 ~ 15787028 (+)
CI01000304_15779082_15779951 ZBTB21 coding upstream 115940 15779082 ~ 15780105 (+)
CI01000304_15776859_15777750 ZBTB21 coding upstream 118277 15776859 ~ 15777768 (+)
CI01000304_15723867_15741978 NA coding upstream 153182 15723867 ~ 15742863 (+)
CI01000304_15964692_15966904 NA coding downstream 66073 15963916 ~ 15967493 (+)
CI01000304_16040037_16043960 NA coding downstream 142194 16040037 ~ 16043960 (+)
CI01000304_16109760_16122597 NA coding downstream 209535 16107378 ~ 16122874 (+)
CI01000304_16132778_16137222 MDH2.S, MDH2, MDH2.L coding downstream 234032 16131875 ~ 16137348 (+)
CI01000304_16138794_16144084 NA coding downstream 240951 16138794 ~ 16144237 (+)
G427904 NA non-coding upstream 44909 15840911 ~ 15851136 (+)
G427917 NA non-coding upstream 81622 15813103 ~ 15814423 (+)
G427915 NA non-coding upstream 84012 15809203 ~ 15812033 (+)
G427906 NA non-coding upstream 154941 15740258 ~ 15741104 (+)
G427902 NA non-coding downstream 24336 15922179 ~ 15938102 (+)
G427961 NA non-coding downstream 88732 15986575 ~ 15987610 (+)
G427894 NA non-coding downstream 96653 15994496 ~ 15996274 (+)
G427855 NA non-coding downstream 169905 16067748 ~ 16068983 (+)
G428020 NA non-coding downstream 190226 16088069 ~ 16089172 (+)
G427860 NA other upstream 6454 15885454 ~ 15889591 (+)
G426828 NA other upstream 945453 14948890 ~ 14950592 (+)
G426312 NA other upstream 1565159 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 2317198 13578049 ~ 13595097 (+)
G425718 NA other upstream 3456959 12436554 ~ 12436605 (+)
G428017 NA other downstream 185387 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 607019 16504764 ~ 16513625 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 858103 16761372 ~ 16765057 (+)
CI01000304_17009769_17023302 ZDHHC20, ZDHHC20A other downstream 1112887 17009769 ~ 17023882 (+)
CI01000304_17315088_17315342 NA other downstream 1416995 17315087 ~ 17315600 (+)

Expression


Co-expression Network