G20591


Basic Information

Item Value
gene id G20591
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 21369065 ~ 21369398 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU24021
GTTCGTGCAAAGATTATTAACCCAATATAGGACATCTGCATCGTTTTCAATGGCAGCAAATGGCCACTGTACTCCCAAATTCGCTGCTCTGGTGTCTGGTTTGGGATGTTTTCTGATAAACCAAAACTACTGTACATAGGCTACATTAAGTATACAAACCAAAGGTTTGCCATTCACATTCCTATACACCAGACTGGTCTGATCATATTTACAGTTTTGCAGCCCCTCTGATGTTGCTGTTCTTGCACTAGACAAGACCAAGGAGCATATTGGTGCCGACCACTGCCAGGCTATAAATACCAGAGCTAACAGGCCAACATGAGTGCTTCTATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24021 True 334 lncRNA 0.38 1 21369065 21369398

Neighbor

gene id symbol gene type direction distance location
LOC110512702 LOC106573599 coding upstream 13207 21353302 ~ 21355858 (+)
LOC110507602 LOC106573596 coding upstream 66004 21271127 ~ 21303061 (+)
LOC110507530 LOC106573595 coding upstream 101411 21194656 ~ 21267654 (+)
LOC110507450 LOC106573594 coding upstream 177884 21148112 ~ 21191181 (+)
LOC110507137 LOC106573592 coding upstream 227214 21134277 ~ 21141851 (+)
LOC110507802 LOC106573603 coding downstream 235626 21605024 ~ 21631294 (+)
LOC110508215 LOC106573607 coding downstream 364196 21733594 ~ 21747189 (+)
LOC110508358 LOC106573608 coding downstream 410343 21779741 ~ 21785244 (+)
LOC110508526 bsg coding downstream 423058 21792456 ~ 21802903 (+)
LOC110508592 LOC106613751 coding downstream 440166 21809564 ~ 21911516 (+)
G20590 NA non-coding upstream 2038 21365220 ~ 21367027 (+)
G20589 NA non-coding upstream 7097 21357738 ~ 21361968 (+)
G20564 NA non-coding upstream 51096 21317745 ~ 21317969 (+)
G19935 NA non-coding upstream 63674 21305123 ~ 21305391 (+)
G19851 NA non-coding upstream 246032 21122675 ~ 21123033 (+)
G20595 NA non-coding downstream 2926 21372324 ~ 21372556 (+)
G20616 NA non-coding downstream 35088 21404486 ~ 21404842 (+)
G20618 NA non-coding downstream 38539 21407937 ~ 21408139 (+)
G20622 NA non-coding downstream 50509 21419907 ~ 21420141 (+)
G20628 NA non-coding downstream 57340 21426738 ~ 21426971 (+)
G19400 NA other upstream 1059167 20309425 ~ 20309898 (+)
G19380 LOC100194703 other upstream 1092170 20276590 ~ 20276895 (+)
G19359 NA other upstream 1126190 20242645 ~ 20242875 (+)
G19083 NA other upstream 1453233 19915586 ~ 19915832 (+)
LOC110503939 LOC106573564 other upstream 1503460 19863734 ~ 19865619 (+)
G20773 NA other downstream 198147 21567545 ~ 21568188 (+)
G23109 NA other downstream 2168998 23538396 ~ 23538863 (+)
G23135 NA other downstream 2205194 23574592 ~ 23574995 (+)
LOC110511358 LOC106573633 other downstream 2503623 23872914 ~ 23905175 (+)
ccl4 ccl4 other downstream 3135257 24504638 ~ 24506125 (+)

Expression


Co-expression Network