G20622


Basic Information

Item Value
gene id G20622
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 21419907 ~ 21420141 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU24052
acctttgtgtatgataacgcaggagggtcacaaggagaagattagtattttccttattgattctcctgcgtattctgtggtgctaggcctaccctggttagcttgccataaccccactgtttcttggccacagagggctctcacggggtggtcgcgagagtgctcaggtaggtatttaggggtttccgttggtgctactacggtggaaagtccagaccaggtctccaccgtgcgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24052 True 235 lncRNA 0.43 1 21419907 21420141

Neighbor

gene id symbol gene type direction distance location
LOC110512702 LOC106573599 coding upstream 64049 21353302 ~ 21355858 (+)
LOC110507602 LOC106573596 coding upstream 116846 21271127 ~ 21303061 (+)
LOC110507530 LOC106573595 coding upstream 152253 21194656 ~ 21267654 (+)
LOC110507450 LOC106573594 coding upstream 228726 21148112 ~ 21191181 (+)
LOC110507137 LOC106573592 coding upstream 278056 21134277 ~ 21141851 (+)
LOC110507802 LOC106573603 coding downstream 184883 21605024 ~ 21631294 (+)
LOC110508215 LOC106573607 coding downstream 313453 21733594 ~ 21747189 (+)
LOC110508358 LOC106573608 coding downstream 359600 21779741 ~ 21785244 (+)
LOC110508526 bsg coding downstream 372315 21792456 ~ 21802903 (+)
LOC110508592 LOC106613751 coding downstream 389423 21809564 ~ 21911516 (+)
G20618 NA non-coding upstream 11768 21407937 ~ 21408139 (+)
G20616 NA non-coding upstream 15065 21404486 ~ 21404842 (+)
G20595 NA non-coding upstream 47351 21372324 ~ 21372556 (+)
G20591 NA non-coding upstream 50509 21369065 ~ 21369398 (+)
G20590 NA non-coding upstream 52880 21365220 ~ 21367027 (+)
G20628 NA non-coding downstream 6597 21426738 ~ 21426971 (+)
G20633 NA non-coding downstream 17529 21437670 ~ 21437923 (+)
G20634 NA non-coding downstream 17983 21438124 ~ 21438327 (+)
G20637 NA non-coding downstream 21328 21441469 ~ 21441756 (+)
G20638 NA non-coding downstream 23942 21444083 ~ 21444320 (+)
G19400 NA other upstream 1110009 20309425 ~ 20309898 (+)
G19380 LOC100194703 other upstream 1143012 20276590 ~ 20276895 (+)
G19359 NA other upstream 1177032 20242645 ~ 20242875 (+)
G19083 NA other upstream 1504075 19915586 ~ 19915832 (+)
LOC110503939 LOC106573564 other upstream 1554302 19863734 ~ 19865619 (+)
G20773 NA other downstream 147404 21567545 ~ 21568188 (+)
G23109 NA other downstream 2118255 23538396 ~ 23538863 (+)
G23135 NA other downstream 2154451 23574592 ~ 23574995 (+)
LOC110511358 LOC106573633 other downstream 2452880 23872914 ~ 23905175 (+)
ccl4 ccl4 other downstream 3084514 24504638 ~ 24506125 (+)

Expression


Co-expression Network