XLOC_002242 (myl10)


Basic Information

Item Value
gene id XLOC_002242
gene name myl10
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 33171501 ~ 33179988 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004291
TTTAACAAGCACCATACACTGTTTTTTCCTCCTCCTGACAGTCAAATCCCTCCAGTGCCCTGCTGACCAACACACCATCAAACCATTCAATCAATCCAGGTTACATCCACATCTGGCCGAACGCAGTGATGTGTGAATCTATCCGGCTTCACACCGCCTTCGGGGGTTAGTTAGCGATCTTCAAACTGATCCTAAGATAGCCCTGACCACACACACATGGATCATCACCTCAAACTCAACAAtagctctgtctctctctctctctatatggTCACTCTTCTGCTATTGTTCCTCCTCCATTGTCTAAACATAGAGCAGGTGGGCTGCAGGGACAATATAAAGGCCGAAAGCCGAGATCTTTGAGTGTCCCTCAGGCTTTTTGAGACCAAGAACAGAGTCAGGAGAAGATCTGCACAATGGCACCAAAGAAGGCAAAGAAGAAGGAAGCCGCCAGCTCTAATGTGTTCAGCATGTTTGAGCAGTCGCAGATCCAGGAGTTTAAAGAGGCTTTCACCATCATGGACCAGAACAGAGATGGCTTTATTGACAAAAACGACTTGAGGGACACATTTGCTGCTCTGGGACGTCTGAACGTTGGCAACGATGAGCTTGATGAGATGCTAAAGGAAGCCTCCGGCCCCATCAACTTCACCATCTTCCTCAGCATGTTCGGAGAGAAGCTCAAAGGTACAGACCCTGAGGAAACTATTCTCAATGCCTTTAAGATCTTCGACCCAGAGGGTACAGGCATCCTAAAAGGAGAAGAGATTAAATATCACCTTATGTCCCAGGCAGACAAATTCACTGAGGCTGAGGTAAACCAGATGTTCACAAACTTCCCCTTGGATGTGGCTGGTAACCTGGATTACAAAAACCTGTGCTACGTCATCACCCACGGAGAGGATAAGGAACAGGAgtaaaaactacatttcccatcatgtttctctgtgtttgttcATGTCCATTGTGTTCCAGTGTGTTGCGTTCCTCTTAAGCTCTGTACCTGCCTTTTGTCAATAAAGAGAAAACAAAAATCACTTTCTGGCTACTGTAGTTATTGTACTGTTTACGTGCTGTCaacaataaatacacattataacACTATAA

Function

symbol description
myl10 Predicted to enable calcium ion binding activity. Is expressed in adaxial cell; heart; slow muscle cell; and somite. Orthologous to human MYL10 (myosin light chain 10).

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
ko04510 Focal adhesion
ko04810 Regulation of actin cytoskeleton
ko04670 Leukocyte transendothelial migration
ko05132 Salmonella infection
ko05131 Shigellosis
ko04812 Cytoskeleton proteins

ZFIN:

id description
ZDB-GENE-050417-421 Predicted to enable calcium ion binding activity. Is expressed in adaxial cell; heart; slow muscle cell; and somite. Orthologous to human MYL10 (myosin light chain 10).

Ensembl:

ensembl_id ENSDARG00000062592

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004291 True 1107 mRNA 0.45 7 33171501 33179988

Neighbor

gene id symbol gene type direction distance location
XLOC_002241 CU929186.1 coding upstream 169068 33002319 ~ 33002433 (+)
XLOC_002240 ppm1e coding upstream 382669 32683089 ~ 32788832 (+)
XLOC_002239 rad51c coding upstream 498993 32662886 ~ 32672508 (+)
XLOC_002238 zbtb21 coding upstream 522698 32646402 ~ 32648803 (+)
XLOC_002236 map6a coding upstream 570121 32560667 ~ 32601380 (+)
XLOC_002243 NA coding downstream 85393 33265381 ~ 33265687 (+)
XLOC_002244 NA coding downstream 177108 33357096 ~ 33359026 (+)
XLOC_002245 NA coding downstream 180340 33360328 ~ 33368165 (+)
XLOC_002246 mdh2 coding downstream 202870 33382858 ~ 33403522 (+)
XLOC_002247 ryr1a coding downstream 226831 33406819 ~ 33540336 (+)
XLOC_002237 NA non-coding upstream 579430 32584417 ~ 32592071 (+)
XLOC_002235 CR388187.1 non-coding upstream 775605 32395780 ~ 32395896 (+)
XLOC_002234 NA non-coding upstream 907203 32259743 ~ 32264298 (+)
XLOC_002228 NA non-coding upstream 1129655 31869282 ~ 32041846 (+)
XLOC_002252 NA non-coding downstream 690201 33870189 ~ 33871012 (+)
XLOC_002255 BX548044.4 non-coding downstream 855701 34035689 ~ 34043319 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G428405 NA non-coding CI01000304 null 16039478 ~ 16042713 (-)